Part of scaffold_156 (Scaffold)

For more information consult the page for scaffold_156 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXC13 ENSTTRG00000004546 (Bottlenosed dolphin)

Gene Details

homeobox C13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004278, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.99%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0678)

BT.27555 ENSBTAG00000000923 (Cow)

Gene Details

homeobox protein Hox-C13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001222, Cow)

Protein Percentage 98.06%
cDNA percentage 95.58%
Ka/Ks Ratio 0.02294 (Ka = 0.0066, Ks = 0.2859)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 993 bp    Location:1147246..1153838   Strand:+
>bmy_04696
ATGACGACTTCGCTGCTCCTGCATCCTCGCTGGCCGGAGAGCCTTATGTACGTCTATGAGGACAGCGCGGCGGAGAGCGGCAGCGGCGGCGGCGGCGGCGGGGGAGGCGGCGGCGCGGGCGGCGCGGGGGGTGGCTGCAGCGGAGCGAGCCCCGGCAAAGCCCCAAGCATGGACGGGCTGGGCAGCAGCTGCCCGGCCAGCCACTGCCGCGACCTGCTTCCGCACCCCGTGCTGGGCCGCCCGCCGGCTCCCCTGGGCGCCCCTCAGGGCGCCGTCTACACGGACATTCCGGCCCCGGAGGCGGCGCGCCAATGCGCCCCGCCGCCGGCGCCCCCCACCTCGTCCAGCGCCACCCTGGGCTACGGCTACCCTTTCGGTGGCAGCTACTACGGCTGCCGCCTGTCGCACAACGTGAACCTGCAGCAAAAGCCTTGCGCCTACCACCCGGGCGATAAGTACCCCGAGCCGTCGGGCGCCCTGCCGGGTGACGACCTGTCCTCCAGGGCCAAGGAGTTCGCCTTCTATCCCAGCTTCGCCAGCTCCTACCAGGCGATGCCCGGCTACCTGGACGTGTCTGTGGTGCCTGGGATCAGCGGGCACCCGGAGCCGCGTCACGACGCGCTCATCCCCGTCGAAGGCTACCAGCACTGGGCTCTCTCCAACGGCTGGGACAGTCAGGTGTACTGCTCCAAGGAGCAGTCGCAGTCCGCCCACCTCTGGAAGTCTCCCTTTCCAGACGTGGTCCCCCTACAGCCTGAGGTCAACAGCTACCGGCGCGGGCGCAAGAAACGCGTGCCCTACACCAAGGTGCAGCTGAAGGAGCTAGAGAAGGAGTATGCGGCCAGCAAGTTCATCACCAAAGAGAAGCGCCGGCGCATCTCGGCTACCACGAACCTCTCGGAGCGCCAGGTCACCATCTGGTTCCAGAACCGGCGGGTCAAAGAGAAGAAGGTGGTCAGCAAATCAAAAGCGCCTCATCTTCACTCTACCTGA

Related Sequences

bmy_04696T0 Protein

Length: 331 aa      View alignments
>bmy_04696T0
MTTSLLLHPRWPESLMYVYEDSAAESGSGGGGGGGGGGAGGAGGGCSGASPGKAPSMDGLGSSCPASHCRDLLPHPVLGRPPAPLGAPQGAVYTDIPAPEAARQCAPPPAPPTSSSATLGYGYPFGGSYYGCRLSHNVNLQQKPCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGYLDVSVVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDVVPLQPEVNSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKVVSKSKAPHLHST*