Part of scaffold_156 (Scaffold)

For more information consult the page for scaffold_156 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMUG1 ENSTTRG00000004528 (Bottlenosed dolphin)

Gene Details

single-strand-selective monofunctional uracil-DNA glycosylase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004255, Bottlenosed dolphin)

Protein Percentage 93.06%
cDNA percentage 93.06%
Ka/Ks Ratio 0.25385 (Ka = 0.0449, Ks = 0.1767)

SMUG1 ENSBTAG00000021974 (Cow)

Gene Details

Single-strand selective monofunctional uracil DNA glycosylase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029297, Cow)

Protein Percentage 86.3%
cDNA percentage 88.13%
Ka/Ks Ratio 0.27761 (Ka = 0.0839, Ks = 0.3021)

SMUG1  (Minke Whale)

Gene Details

single-strand-selective monofunctional uracil-DNA glycosylase 1

External Links

Gene match (Identifier: BACU008095, Minke Whale)

Protein Percentage 94.52%
cDNA percentage 94.75%
Ka/Ks Ratio 0.2903 (Ka = 0.0366, Ks = 0.1259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 441 bp    Location:1378512..1375623   Strand:-
>bmy_04708
ATGGCTGTGCCCCAGGCTTTCCCGCCGGGGCCCCTCCATGAGGGGGGTGCCCTGGTGGAGCCCCAGCCCTCCCCTCGAAGCTCGGCCGAGGGCTTCTTGGAGGAGGAGCTCCGGCTTAACGCTGAGCTGAAGCAGCTGCAGTTTTCTGAGCCTGTGGGCATCGTCTACAATCCGGTGGAGTATGCGTGGGAGCCGCATCGCAGCTACGTGACCCGCTACTGCCAGGGCCCCAAGCAAGTGCTCTTCTTGGGCATGAACCCAGGACCCTTTGGCATGGCCCAGACTGGGGTGCCCTTTGGGGAAGTGAGTGTAGTCCGGGACTGGTTGGGCATTGGGGGGCCTGTGCAGAGCCCTCCCCAAGAGCACCCCAAGCGACCAGTGCTGGGACTGGAGTGCCCTCAGTCCGAGGGACCAGGACAAAGCGTGGGTCATGGCTGCTGA

Related Sequences

bmy_04708T0 Protein

Length: 147 aa      View alignments
>bmy_04708T0
MAVPQAFPPGPLHEGGALVEPQPSPRSSAEGFLEEELRLNAELKQLQFSEPVGIVYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSVVRDWLGIGGPVQSPPQEHPKRPVLGLECPQSEGPGQSVGHGC*