Sequence detailsbmy_04715 (Coding sequence)

Part of scaffold_156 (SequenceType object (1))

For more information consult the page for scaffold_156 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGA5ENSTTRG00000004472 (Bottlenosed dolphin)

Gene Details

integrin, alpha 5 (fibronectin receptor, alpha polypeptide)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004215, Bottlenosed dolphin)

Protein Percentage 98.86%
cDNA percentage 98.42%
Ka/Ks Ratio 0.0985 (Ka = 0.0051, Ks = 0.0517)

BT.27462ENSBTAG00000013745 (Cow)

Gene Details

integrin alpha-5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018261, Cow)

Protein Percentage 96.48%
cDNA percentage 94.9%
Ka/Ks Ratio 0.09157 (Ka = 0.0166, Ks = 0.1809)

ITGA5 (Minke Whale)

Gene Details

integrin, alpha 5 (fibronectin receptor, alpha polypeptide)

External Links

Gene match (Identifier: BACU008102, Minke Whale)

Protein Percentage 98.77%
cDNA percentage 98.9%
Ka/Ks Ratio 0.20604 (Ka = 0.0056, Ks = 0.027)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGA5 (Human)   Itga5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3309 bp    Location:1564845..1543928   Strand:-
Raw sequence 
>bmy_04715
ATGCCCCCCCGCCCGCCCCCCCGGCAGGCGGGGGGAGGGCTCAGCCGGGAGTTTGGCAAACTCCTCCCCGCGTTGAGTCATTCGCCTCTGGGAGGTTTAGGAAGCGGCTCCGGGTCGGTGGCCCCAGGACAGGGAAGAGCGGGTGCTATGGGGAGCCGGACGCCAGGGTCCCCTCTCCTCGCCGTGCAGCTGCGCTGGGGCCCCCGGCGCCGATCCCGGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTGCCGCCGCCGCCCAGGGTCGGGGGCTTCAACTTAGACGCGGAGGCCCCAGCAGTGCTCTCTGGGCCCCCGGGATCCTTCTTCGGCTTCTCGGTGGAGTTTTACCGGCCGGGGACAGACGGGGTCAGCGTGCTGGTGGGAGCGCCCAAGGCTAACACCAGCCAGCCGGGAGTGCTGCAGGGCGGTGCCGTCTACCTCTGTCCCTGGGGCACCAGCCCGGCACAGTGCACCCCCATTGAATTTGACAGCAAAGGCTCTCGGATCCTGGAGTCCTCGCCGCCGTCCAGCCTCGAGGGAGAGGAGCCTGTGGAGTACAAGTCCCTGCAGTGGTTCGGAGCAACGGTGCGAGCCCATGGCTCCTCCATCTTGGCCTGTGCTCCCCTCTACAGCTGGCGCACCGAGAAGGAGCCGCTGAGCGATCCCGTGGGCACCTGCTACCTCTCCACAGACAACTTCACCCGGATTCTGGAGTATGCGCCCTGCCGCTCAGATTTCAGCCGGGCAGCAGGGCAGGGTTACTGCCAAGGGGGCTTCAGTGCCGAGTTCACCAAGACTGGGCGTGTGGTCCTGGGCGGACCAGGGAGCTATTTCTGGCAAGGCCAGATCCTGTCCGCCACCCAGGAGCAGATTGCAGAATCCTATTACCCCGGGTACCTGATCAACCCAGTTCGGGGGCAGCTGCAGACTCGCCAGGCCAGTTCCATTTACGATGACAGCTACCTGGGATACTCTGTGGCTGTAGGTGAATTCAGTGGTGATGACACAGAAGACTTCGTTGCTGGCGTGCCCAAAGGGAACCTCACCTATGGTTACGTCACCATCCTTAATGGCTCAGACATCCGGTCCCTCTACAACTTCTCAGGGGAACAGATGGCCTCCTACTTTGGCTATTCAGTGGCTGCCACAGACATCAATGGGGACGGGCTGGACGACTTGCTGGTAGGGGCACCCCTGCTCATGGAGCGGACAGCCGACGGGCGGCCGCAGGAGGTGGGCAGGGTCTACATCTACCTGCAGCGCCCGGCCGGCATGGAGCCCATGCCCACCCTTACCCTCACTGGCCATGATGAGTTTGGTCGATTCGGCAGTTCCCTGACCCCCCTGGGGGACCTGGACCAGGATGGCTACAATGATGTAGCCGTTGGGGCTGCCTTTGGTGGGGAGAACCAGCAGGGAGTGGTGTTTGTATTCCCTGGGGGCCCAGGGGGCCTGGCCTCTAAGCCTTCCCAGGTTCTGCTGCCCCTGTGGGCAGCTGGCCACACGCCGGACTTCTTTGGCTCCGCCCTTCGAGGAGGCCGAGACCTGGATGGCAACGGATACCCTGATCTGATTGTGGGGTCCTTTGGTGTAGACAAGGCTGTGGTGTACAGGGGTCGCCCCATCGTGTCTGCCAGTGCCTCCCTCACCATCTTTCCCGCCATGTTCAACCCAGAGGAGCATAGCTGCAGCTTGGGGGGGAACCCTGCGTCCTGCATCAATCTCAGCTTCTGCCTCAATGCTTCTGGAAAACACGTTCCTGACTCCATCGGCTTCACGGTGGAGCTCCAGTTGGACTGGCAGAAGCAGAAGGGCGGAGCGCGGCGGGCCCTGTTCCTGGCCTCCCGACAGGCCACCCTGACCCAGACCCTGCTCATCCAGAACGGGGCTCGGGAGGATTGCAGAGAGATGAAGATCTACCTCAGGAACGAGTCAGAGTTTCGAGACAAACTCTCCCCAATTCACATCGCCCTCAACTTCTCCCTGGACCCCCAAGCCCCTGTGGACAGCCACGGCCTTCGGCCCGTCCTACACTACCAGAGCAAGAGCCGCATAGAGGACAAGGCTCAGATCTTGCTGGACTGTGGAGAAGACAATATCTGTGTGCCAGACCTACAGCTGGAAGTGTTTGGGGAGCAGAACCACGTGTACCTGGGCGACAAGAACTCTCTGAACCTCACTTTCCATGCCCAGAATGTGGGTGAGGGCGGCGCCTACGAGGCAGAGCTTCGCGTCACGGCCCCTCCGGAGGCTGAGTACTCAGGACTCGTCAGGCACCCAGGGAACTTCTCCAGCCTGAGCTGTGACTACTTTGCTGTGAACCAGAGCCGCCTGCTGGTGTGTGACCTGGGCAACCCCATGAAGGCGGGAGCCAGTCTCTGGGGTGGCCTTCGGTTCACAGTCCCGCACCTCAGGGACACGAAGAAAACCATCCAGTTTGACTTCCAGATCCTCAGCAAGAATCTCAACAACTCGCAAAGCGAAGTGGTTTCCTTCCGGCTCTCCGTGGAAGCTCAGGCCCAGGTCTCCCTTAACGGTGTCTCCAAGCCCGAGGCAGTGCTATTCCCGGTGAGCGACTGGCATCCCCGAGACCAGCCGCAGGAAGAGGGGGACGTGGGCCCTGCTGTCCACCACGTCTATGAGCTCATCAACCTGGGCCCCAGCTCCATTAGCCGGGGCGTGCTGGAGCTCAGCTGTCCCCAGGCTCTGGATGGTCAGCAGCTCCTCTACGTGACCAGGGTCACAGGACTCAGCAACTGCACCACCAGTCACCCCCCCAACCCACAGGGCCTGGAGTTGGATCCCGAGGGTTCCCAGCACCACCGGCTGCAAAGACGGGATGCTCCAGGCCGGAGCCCTGCCTCCTCAGGGCCTCAGATCCTGAAATGCCCGGAGGCCGAGTGTTTCCGGCTGCGCTGCGAGCTGGGGCCACTGCACCGGCAAGAGAGCCGAAGTCTGCTACTGCATTTCCGCGTCTGGGCCAAGACCTTCCTCCAGCGGGAACACCAGCCRTTTAGTCTGCAGTGTGAAGCTGTGTATGAAGCCCTGAAGATGCCCTACCGAATCCTGCCTCGGCAGCTTCCCCGAAAGGAACTGCAGGTGGCCACAGCCGTGCAGTGGATCAAGGCAGAGGGCAGCCACAGCGTCCCGCTGTGGATCATTATCCTAGCCATCCTCATTGGCCTCCTGCTCCTAGGTCTGCTCATCTATATCCTCTACAAGCTCGGATTCTTCAAACGCTCCCTCCCATACGGCACCGCCATGGAAAAAGCTCAGCTCAAGCCTCCAGCCACCTCTGATGCCTGA

Related Sequences

bmy_04715T0 SequenceType object (3)

Length: 1103 aa      View alignments
>bmy_04715T0
MPPRPPPRQAGGGLSREFGKLLPALSHSPLGGLGSGSGSVAPGQGRAGAMGSRTPGSPLLAVQLRWGPRRRSRLLPLLLLLLLPPPPRVGGFNLDAEAPAVLSGPPGSFFGFSVEFYRPGTDGVSVLVGAPKANTSQPGVLQGGAVYLCPWGTSPAQCTPIEFDSKGSRILESSPPSSLEGEEPVEYKSLQWFGATVRAHGSSILACAPLYSWRTEKEPLSDPVGTCYLSTDNFTRILEYAPCRSDFSRAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYYPGYLINPVRGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTILNGSDIRSLYNFSGEQMASYFGYSVAATDINGDGLDDLLVGAPLLMERTADGRPQEVGRVYIYLQRPAGMEPMPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAVGAAFGGENQQGVVFVFPGGPGGLASKPSQVLLPLWAAGHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPIVSASASLTIFPAMFNPEEHSCSLGGNPASCINLSFCLNASGKHVPDSIGFTVELQLDWQKQKGGARRALFLASRQATLTQTLLIQNGAREDCREMKIYLRNESEFRDKLSPIHIALNFSLDPQAPVDSHGLRPVLHYQSKSRIEDKAQILLDCGEDNICVPDLQLEVFGEQNHVYLGDKNSLNLTFHAQNVGEGGAYEAELRVTAPPEAEYSGLVRHPGNFSSLSCDYFAVNQSRLLVCDLGNPMKAGASLWGGLRFTVPHLRDTKKTIQFDFQILSKNLNNSQSEVVSFRLSVEAQAQVSLNGVSKPEAVLFPVSDWHPRDQPQEEGDVGPAVHHVYELINLGPSSISRGVLELSCPQALDGQQLLYVTRVTGLSNCTTSHPPNPQGLELDPEGSQHHRLQRRDAPGRSPASSGPQILKCPEAECFRLRCELGPLHRQESRSLLLHFRVWAKTFLQREHQPFSLQCEAVYEALKMPYRILPRQLPRKELQVATAVQWIKAEGSHSVPLWIIILAILIGLLLLGLLIYILYKLGFFKRSLPYGTAMEKAQLKPPATSDA*