Part of scaffold_156 (Scaffold)

For more information consult the page for scaffold_156 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R1A ENSTTRG00000004436 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004182, Bottlenosed dolphin)

Protein Percentage 94.74%
cDNA percentage 97.66%
Ka/Ks Ratio 1.17087 (Ka = 0.025, Ks = 0.0213)

PPP1R1A ENSBTAG00000010907 (Cow)

Gene Details

protein phosphatase 1 regulatory subunit 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014486, Cow)

Protein Percentage 86.36%
cDNA percentage 93.69%
Ka/Ks Ratio 1.08363 (Ka = 0.0688, Ks = 0.0635)

PPP1R1A  (Minke Whale)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 1A

External Links

Gene match (Identifier: BACU018903, Minke Whale)

Protein Percentage 97.08%
cDNA percentage 98.25%
Ka/Ks Ratio 0.66813 (Ka = 0.0158, Ks = 0.0236)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 690 bp    Location:1704382..1696679   Strand:-
>bmy_04719
CCGCGGAGTCCCCGGGGCCGCGAGCCGGGAGCGCTGAGCCGGGAGCCTAGAGCCAAGCGCGCCGGGCTGGGGCCGGGCCGGAGCGGAGCGAAGAGGGAGCGCTCCCGCCCCAGCCCCGAGTCCGCCGCCTGCCCGCCCGCCGCCGCCGCCGGCCCAGCGGCCGCCGCCCCAGCCATGGAGCAAGACCACAGCCCCCGGAAGATCCAGTTCACCGTCCCGCTGCTAGAGCCGCACCTTGACCCTGAGGCGGCGGAGCAGATCCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGGTGGATGAAGACCGGGTCCCCAACCCGCATCTCAAGTCCACTTTGTCCATGTCTCCACGGCAACAGAAGAAGGTGACGAGGACCACACCCACAATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAGGGAGAGGAGCCTGAAGGAGCCGCTGACAGCACAGGGACACAGGAGTCCTGCCCACCTGGGATCAGAGACACAGCAGCGGAGTCGCGGCTGCGCACCTCTGGGAAAGCACACAAGCCTGCAGAATCCATCCCTAACACTCAGGAGAGGGGCAGTGAGAAACCCAGCACAGAGGAACCCTCAACCCATAGACCACCATCGGATTCCCAGGGAGCCAGTTCGGTCTGA

Related Sequences

bmy_04719T0 Protein

Length: 230 aa      View alignments
>bmy_04719T0
PRSPRGREPGALSREPRAKRAGLGPGRSGAKRERSRPSPESAACPPAAAAGPAAAAPAMEQDHSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEVDEDRVPNPHLKSTLSMSPRQQKKVTRTTPTMKELQMMVEHHLGQQQQGEEPEGAADSTGTQESCPPGIRDTAAESRLRTSGKAHKPAESIPNTQERGSEKPSTEEPSTHRPPSDSQGASSV*