Part of scaffold_156 (SequenceType object (1))

For more information consult the page for scaffold_156 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R1AENSTTRG00000004436 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 1A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004182, Bottlenosed dolphin)

Protein Percentage 94.74%
cDNA percentage 97.66%
Ka/Ks Ratio 1.17087 (Ka = 0.025, Ks = 0.0213)

PPP1R1AENSBTAG00000010907 (Cow)

Gene Details

protein phosphatase 1 regulatory subunit 1A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014486, Cow)

Protein Percentage 86.36%
cDNA percentage 93.69%
Ka/Ks Ratio 1.08363 (Ka = 0.0688, Ks = 0.0635)

PPP1R1A (Minke Whale)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 1A

External Links

Gene match (Identifier: BACU018903, Minke Whale)

Protein Percentage 97.08%
cDNA percentage 98.25%
Ka/Ks Ratio 0.66813 (Ka = 0.0158, Ks = 0.0236)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 690 bp    Location:1704382..1696679   Strand:-
>bmy_04719
CCGCGGAGTCCCCGGGGCCGCGAGCCGGGAGCGCTGAGCCGGGAGCCTAGAGCCAAGCGCGCCGGGCTGGGGCCGGGCCGGAGCGGAGCGAAGAGGGAGCGCTCCCGCCCCAGCCCCGAGTCCGCCGCCTGCCCGCCCGCCGCCGCCGCCGGCCCAGCGGCCGCCGCCCCAGCCATGGAGCAAGACCACAGCCCCCGGAAGATCCAGTTCACCGTCCCGCTGCTAGAGCCGCACCTTGACCCTGAGGCGGCGGAGCAGATCCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGGTGGATGAAGACCGGGTCCCCAACCCGCATCTCAAGTCCACTTTGTCCATGTCTCCACGGCAACAGAAGAAGGTGACGAGGACCACACCCACAATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAGGGAGAGGAGCCTGAAGGAGCCGCTGACAGCACAGGGACACAGGAGTCCTGCCCACCTGGGATCAGAGACACAGCAGCGGAGTCGCGGCTGCGCACCTCTGGGAAAGCACACAAGCCTGCAGAATCCATCCCTAACACTCAGGAGAGGGGCAGTGAGAAACCCAGCACAGAGGAACCCTCAACCCATAGACCACCATCGGATTCCCAGGGAGCCAGTTCGGTCTGA

Related Sequences

bmy_04719T0 SequenceType object (3)

Length: 230 aa      View alignments
>bmy_04719T0
PRSPRGREPGALSREPRAKRAGLGPGRSGAKRERSRPSPESAACPPAAAAGPAAAAPAMEQDHSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEVDEDRVPNPHLKSTLSMSPRQQKKVTRTTPTMKELQMMVEHHLGQQQQGEEPEGAADSTGTQESCPPGIRDTAAESRLRTSGKAHKPAESIPNTQERGSEKPSTEEPSTHRPPSDSQGASSV*