Part of scaffold_163 (Scaffold)

For more information consult the page for scaffold_163 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC39A12 ENSTTRG00000013135 (Bottlenosed dolphin)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012463, Bottlenosed dolphin)

Protein Percentage 65.84%
cDNA percentage 67.97%
Ka/Ks Ratio 0.5259 (Ka = 0.0878, Ks = 0.1669)

SLC39A12 ENSBTAG00000015525 (Cow)

Gene Details

Zinc transporter ZIP12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020631, Cow)

Protein Percentage 83.49%
cDNA percentage 86.44%
Ka/Ks Ratio 0.38359 (Ka = 0.1088, Ks = 0.2836)

SLC39A12  (Minke Whale)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene match (Identifier: BACU017205, Minke Whale)

Protein Percentage 90.83%
cDNA percentage 92.85%
Ka/Ks Ratio 0.5625 (Ka = 0.0625, Ks = 0.1111)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2481 bp    Location:1537441..1591975   Strand:+
>bmy_04754
ACATTCCTCCAGTTACGAGTTGACACCGTGAACGCCAACCCACGCACCTCCATCAGAGGCAGACTTGGGCTGAAGGAAGAGTGGAAATGTGCTTCTGGAGAAAGCTTTCTCCTGATTCCCTTGACTGAGACAGAAAAACCCTCAACTCCAGACAGCAACGGCACTTGGAGTCCAGGGCAACTGACGGAAATTCTACATGTTCTCTCTGCAGAAGAGCCCACCCCCCTGAACCACTCAAGAAGCCTCATCAGAACCCTGCTAGAGAAAACCGGGTGCCCACGGAGGACAGACGGAAGGCAAGGAGATTGCAATCTGTGCTTCGATCCAGATGCCCTGTTACTAATAGCTGGAGGAGATTTCAAGGATCAGCTCAGAGAGGAAGTGGTCCAGAGAGTTTCTCTTCTCCTCCTCTATTACATCATTCATCAGGAAGAGATCTGCTCTTCCAAGCTCAACATGAGTAATAAGGAGTATACATTTTACCTACACAGCCTTCTCAGCCTCAGGCAGGATGAAGACTCCTATTTCCTTTCACAGAATGAGACGGAAGATATCCTGGCTTTCACCAGGCAGTACTTTGACACTTCCAGAAGCCAGTGTATGGAAACCAAAGTGCTGCAGAAAAAATCTGGTATCTCAAGCAGTGATGGTGCCGATGAAAATACACTTCCTCAGTTGGCGGAGACAATCATTGCTTTGTCCCTCCAAGGTGTTTGTCTGGGACAAAGAAACTTGCCGTCCCCAGACTATTTTACAGAATATATTTTCAGTTCCTTGAATAGTACAAATACTCTCCATCTATCAGAACTAGACCAACTCCTCARTACTCTCTGGACTAAAAATACCTGTATCAGAAAAGATAGAATCCATCAACTTCAAAGGAAACAAAACAACCTAACAATCCATGATTGGGCCTACCCTAATCTATCTGTATCCGAGGACCCAGAATCAGATGACAGTCCAATTTCCTGGGATCAGACTTGCTTCTCTGCTGGACAATTGGTGGAGATATTTCTACAGAACAAGCTTTCAGCCATCTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGAATCATCCAGCAATTACTGAGCTGCTCTTGCCAGCTGCCCCAGGACCAACAAGCAAAGCTGGCACCCCCCACTCCAGAGAAATATGGCTACAGCACCATGGCAGTGACAGTGCTCACGCTGGGCTCCATGCTCGGGACGACCCTGATCCTTTTCCACTGCTGCGAGGAGAACTACAGGCTCATTTTACAGCTGTTTGTGGGTCTGGCTGTTGGGACACTTTCTGGGGATGCTCTGCTGCATCTGATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCTCAGAGTTTGGACATTTCCATGAAAACAAGGGCCATATTTGGAAACTGTTGGGATTAATTGGAGGCATCCATGGATTTTTCTTAATAGAAAAATGTTTTATTCTTCTTGTATCACCAAGTGCCGAGCAGGGCATGTCACTGGTTAATGGGCATATGGGACATTCCCGCCATCTTGCATTCAACACTGAATTAAGTGACCAGTCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAGGCCCAGAAGATGCAGCTGAAATTCCTATAGGCAGTCTGAATGCCCCCAACAGAAAATGCAAAACCATTAGCTTGTTAGCAATAATGATCCTGGTTGGGGACAGCCTGCATAATTTTGCAGATGGCCTAGTCATAGGAGCAGCCTTCTCATCTTCATCCGAGTCAGGAGTGACCACAACAATTGCTATCTTGTGTCATGAAATTCCCCACGAAATGGGAGACTTTGCTGTGCTCTTAAGCTCTGGACTTCCTATTAAGATTGCCATCCTGATGAATTTTATAAGTGCTTTAACTGCCTTCATAGGACTGTATATTGGCCTCTCGGTATCCACGGATCCATGTATTCAGAACTGGATCTTAACAATTACTGCTGGGATGTTCTTATATTTRTCCTTGGTGGAAATGTGTAGCCTCTCTTCAAGTATGATGGATGTGTATAAGGAAAAGACCAGTCCTGGAAGTACTGTTTTTTTCAGCAGTTTGGATAAGAGAGACTTTATTTTTAACGATATGATTTATTATTTAAAGAATAAGTTAATTCACTTTGAAGAGCATTATTCTTTCTCACTACGTAAATCTCTGGGTTGCTTCCTCTTCTGCTCTGCACTTGGGTTTTTTGTTTGTTCGTGTTTGGTTTTTTGTTTTGATGCTCTTTTAAAACTTCTTTTCACTGACATGATAATGGGAGCGGAAACAATCCTCTGCTTTGAAAATATACCCAGACACAGAAAAATAAGATCCATCTATGAAACCCACTCAAGAACTTTAAATAAATCCAGTGCAATTCAATCAATAATCTATAATCTCAAGTTGGCTCTGCTCACTGAAACAGAAATCTGCTGCAATTCCATCCACTGTTTTCTCTTCTTCCTCAATTTTAAGTTATATTAA

Related Sequences

bmy_04754T0 Protein

Length: 827 aa      View alignments
>bmy_04754T0
TFLQLRVDTVNANPRTSIRGRLGLKEEWKCASGESFLLIPLTETEKPSTPDSNGTWSPGQLTEILHVLSAEEPTPLNHSRSLIRTLLEKTGCPRRTDGRQGDCNLCFDPDALLLIAGGDFKDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYTFYLHSLLSLRQDEDSYFLSQNETEDILAFTRQYFDTSRSQCMETKVLQKKSGISSSDGADENTLPQLAETIIALSLQGVCLGQRNLPSPDYFTEYIFSSLNSTNTLHLSELDQLLXTLWTKNTCIRKDRIHQLQRKQNNLTIHDWAYPNLSVSEDPESDDSPISWDQTCFSAGQLVEIFLQNKLSAISKEDFKQMSPGIIQQLLSCSCQLPQDQQAKLAPPTPEKYGYSTMAVTVLTLGSMLGTTLILFHCCEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEASEFGHFHENKGHIWKLLGLIGGIHGFFLIEKCFILLVSPSAEQGMSLVNGHMGHSRHLAFNTELSDQSGRGKSASTIQLKGPEDAAEIPIGSLNAPNRKCKTISLLAIMILVGDSLHNFADGLVIGAAFSSSSESGVTTTIAILCHEIPHEMGDFAVLLSSGLPIKIAILMNFISALTAFIGLYIGLSVSTDPCIQNWILTITAGMFLYLSLVEMCSLSSSMMDVYKEKTSPGSTVFFSSLDKRDFIFNDMIYYLKNKLIHFEEHYSFSLRKSLGCFLFCSALGFFVCSCLVFCFDALLKLLFTDMIMGAETILCFENIPRHRKIRSIYETHSRTLNKSSAIQSIIYNLKLALLTETEICCNSIHCFLFFLNFKLY*