Sequence detailsbmy_04754 (Coding sequence)

Part of scaffold_163 (SequenceType object (1))

For more information consult the page for scaffold_163 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC39A12ENSTTRG00000013135 (Bottlenosed dolphin)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012463, Bottlenosed dolphin)

Protein Percentage 65.84%
cDNA percentage 67.97%
Ka/Ks Ratio 0.5259 (Ka = 0.0878, Ks = 0.1669)

SLC39A12ENSBTAG00000015525 (Cow)

Gene Details

Zinc transporter ZIP12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020631, Cow)

Protein Percentage 83.49%
cDNA percentage 86.44%
Ka/Ks Ratio 0.38359 (Ka = 0.1088, Ks = 0.2836)

SLC39A12 (Minke Whale)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene match (Identifier: BACU017205, Minke Whale)

Protein Percentage 90.83%
cDNA percentage 92.85%
Ka/Ks Ratio 0.5625 (Ka = 0.0625, Ks = 0.1111)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC39A12 (Human)   Slc39a12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2481 bp    Location:1537441..1591975   Strand:+
Raw sequence 
>bmy_04754
ACATTCCTCCAGTTACGAGTTGACACCGTGAACGCCAACCCACGCACCTCCATCAGAGGCAGACTTGGGCTGAAGGAAGAGTGGAAATGTGCTTCTGGAGAAAGCTTTCTCCTGATTCCCTTGACTGAGACAGAAAAACCCTCAACTCCAGACAGCAACGGCACTTGGAGTCCAGGGCAACTGACGGAAATTCTACATGTTCTCTCTGCAGAAGAGCCCACCCCCCTGAACCACTCAAGAAGCCTCATCAGAACCCTGCTAGAGAAAACCGGGTGCCCACGGAGGACAGACGGAAGGCAAGGAGATTGCAATCTGTGCTTCGATCCAGATGCCCTGTTACTAATAGCTGGAGGAGATTTCAAGGATCAGCTCAGAGAGGAAGTGGTCCAGAGAGTTTCTCTTCTCCTCCTCTATTACATCATTCATCAGGAAGAGATCTGCTCTTCCAAGCTCAACATGAGTAATAAGGAGTATACATTTTACCTACACAGCCTTCTCAGCCTCAGGCAGGATGAAGACTCCTATTTCCTTTCACAGAATGAGACGGAAGATATCCTGGCTTTCACCAGGCAGTACTTTGACACTTCCAGAAGCCAGTGTATGGAAACCAAAGTGCTGCAGAAAAAATCTGGTATCTCAAGCAGTGATGGTGCCGATGAAAATACACTTCCTCAGTTGGCGGAGACAATCATTGCTTTGTCCCTCCAAGGTGTTTGTCTGGGACAAAGAAACTTGCCGTCCCCAGACTATTTTACAGAATATATTTTCAGTTCCTTGAATAGTACAAATACTCTCCATCTATCAGAACTAGACCAACTCCTCARTACTCTCTGGACTAAAAATACCTGTATCAGAAAAGATAGAATCCATCAACTTCAAAGGAAACAAAACAACCTAACAATCCATGATTGGGCCTACCCTAATCTATCTGTATCCGAGGACCCAGAATCAGATGACAGTCCAATTTCCTGGGATCAGACTTGCTTCTCTGCTGGACAATTGGTGGAGATATTTCTACAGAACAAGCTTTCAGCCATCTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGAATCATCCAGCAATTACTGAGCTGCTCTTGCCAGCTGCCCCAGGACCAACAAGCAAAGCTGGCACCCCCCACTCCAGAGAAATATGGCTACAGCACCATGGCAGTGACAGTGCTCACGCTGGGCTCCATGCTCGGGACGACCCTGATCCTTTTCCACTGCTGCGAGGAGAACTACAGGCTCATTTTACAGCTGTTTGTGGGTCTGGCTGTTGGGACACTTTCTGGGGATGCTCTGCTGCATCTGATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCTCAGAGTTTGGACATTTCCATGAAAACAAGGGCCATATTTGGAAACTGTTGGGATTAATTGGAGGCATCCATGGATTTTTCTTAATAGAAAAATGTTTTATTCTTCTTGTATCACCAAGTGCCGAGCAGGGCATGTCACTGGTTAATGGGCATATGGGACATTCCCGCCATCTTGCATTCAACACTGAATTAAGTGACCAGTCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAGGCCCAGAAGATGCAGCTGAAATTCCTATAGGCAGTCTGAATGCCCCCAACAGAAAATGCAAAACCATTAGCTTGTTAGCAATAATGATCCTGGTTGGGGACAGCCTGCATAATTTTGCAGATGGCCTAGTCATAGGAGCAGCCTTCTCATCTTCATCCGAGTCAGGAGTGACCACAACAATTGCTATCTTGTGTCATGAAATTCCCCACGAAATGGGAGACTTTGCTGTGCTCTTAAGCTCTGGACTTCCTATTAAGATTGCCATCCTGATGAATTTTATAAGTGCTTTAACTGCCTTCATAGGACTGTATATTGGCCTCTCGGTATCCACGGATCCATGTATTCAGAACTGGATCTTAACAATTACTGCTGGGATGTTCTTATATTTRTCCTTGGTGGAAATGTGTAGCCTCTCTTCAAGTATGATGGATGTGTATAAGGAAAAGACCAGTCCTGGAAGTACTGTTTTTTTCAGCAGTTTGGATAAGAGAGACTTTATTTTTAACGATATGATTTATTATTTAAAGAATAAGTTAATTCACTTTGAAGAGCATTATTCTTTCTCACTACGTAAATCTCTGGGTTGCTTCCTCTTCTGCTCTGCACTTGGGTTTTTTGTTTGTTCGTGTTTGGTTTTTTGTTTTGATGCTCTTTTAAAACTTCTTTTCACTGACATGATAATGGGAGCGGAAACAATCCTCTGCTTTGAAAATATACCCAGACACAGAAAAATAAGATCCATCTATGAAACCCACTCAAGAACTTTAAATAAATCCAGTGCAATTCAATCAATAATCTATAATCTCAAGTTGGCTCTGCTCACTGAAACAGAAATCTGCTGCAATTCCATCCACTGTTTTCTCTTCTTCCTCAATTTTAAGTTATATTAA

Related Sequences

bmy_04754T0 SequenceType object (3)

Length: 827 aa      View alignments
>bmy_04754T0
TFLQLRVDTVNANPRTSIRGRLGLKEEWKCASGESFLLIPLTETEKPSTPDSNGTWSPGQLTEILHVLSAEEPTPLNHSRSLIRTLLEKTGCPRRTDGRQGDCNLCFDPDALLLIAGGDFKDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYTFYLHSLLSLRQDEDSYFLSQNETEDILAFTRQYFDTSRSQCMETKVLQKKSGISSSDGADENTLPQLAETIIALSLQGVCLGQRNLPSPDYFTEYIFSSLNSTNTLHLSELDQLLXTLWTKNTCIRKDRIHQLQRKQNNLTIHDWAYPNLSVSEDPESDDSPISWDQTCFSAGQLVEIFLQNKLSAISKEDFKQMSPGIIQQLLSCSCQLPQDQQAKLAPPTPEKYGYSTMAVTVLTLGSMLGTTLILFHCCEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEASEFGHFHENKGHIWKLLGLIGGIHGFFLIEKCFILLVSPSAEQGMSLVNGHMGHSRHLAFNTELSDQSGRGKSASTIQLKGPEDAAEIPIGSLNAPNRKCKTISLLAIMILVGDSLHNFADGLVIGAAFSSSSESGVTTTIAILCHEIPHEMGDFAVLLSSGLPIKIAILMNFISALTAFIGLYIGLSVSTDPCIQNWILTITAGMFLYLSLVEMCSLSSSMMDVYKEKTSPGSTVFFSSLDKRDFIFNDMIYYLKNKLIHFEEHYSFSLRKSLGCFLFCSALGFFVCSCLVFCFDALLKLLFTDMIMGAETILCFENIPRHRKIRSIYETHSRTLNKSSAIQSIIYNLKLALLTETEICCNSIHCFLFFLNFKLY*