Part of scaffold_170 (Scaffold)

For more information consult the page for scaffold_170 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TXNRD1 ENSTTRG00000005343 (Bottlenosed dolphin)

Gene Details

thioredoxin reductase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005043, Bottlenosed dolphin)

Protein Percentage 58.57%
cDNA percentage 61.43%
Ka/Ks Ratio 0.59871 (Ka = 0.1556, Ks = 0.2599)

TXNRD1 ENSBTAG00000013912 (Cow)

Gene Details

thioredoxin reductase 1, cytoplasmic

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053996, Cow)

Protein Percentage 91.48%
cDNA percentage 91.25%
Ka/Ks Ratio 0.2004 (Ka = 0.0465, Ks = 0.2321)

TXNRD1  (Minke Whale)

Gene Details

thioredoxin reductase 1

External Links

Gene match (Identifier: BACU000910, Minke Whale)

Protein Percentage 97.89%
cDNA percentage 98.6%
Ka/Ks Ratio 0.45278 (Ka = 0.01, Ks = 0.022)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1767 bp    Location:1305324..1346702   Strand:+
>bmy_04812
ATGCCAGTTGATGAATACTGGCTCTGTTTACCAGCCTCTCATGTTAGACCTTTTGTACAGACGGTCAGGGTGATGCAGTCTTGCCCCTGCTGTTGCTGGTTTCCAGGTGCTCTCCCTTCAATCCCTGAGCCATGGTGTGTACTTGCCGTGCTGCCTGGGGGCAGCCACGGTGCCGCGCCTCCTCCACCTTTCCATACTGCACCCCCTTCTACATCCCAAGCATCCAATTCTACTGATCCTAAGCTCTGCCTTTTGTCCCCCACATCTGATGGTAGGCAGGAGAAAAATGTGCAGTCTGGGCTGGCTTATCAGGAGGGCRGACTTCAAAATCTACTGAAAATGAATGGCTCCAAGGATCTCCCCGAGTCCTATGACTATGACCTCATCATCGAGGCAGCCAAATATAACAAGAAGGTGATGGTCCTGGATTTTGTCACTCCAACCCCTCTTGGAACAACATGGGGTCTCGGAGGAACATGTGTGAATGTGGGTTGCATACCTAAAAAACTGATGCACCAAGCAGCTTTGTTAGGACAAGCTCTCCGAGACTCTCGAAACTATGGGTGGAACGTCGAGGAGATAGTGAAACATGACTGGGAGAGAATGACAGAAGCTATCCAGAATCACATTGGCTCTCTGAACTGGGGCTACCGTGTGGCTCTGCGGGAGAAAAAGGTCACCTATGAGAACGCGTACGGGCAGTTTGTTGGGCCTCATAGGATTAAGGCAACAAACAACAAAGGCAAAGAGAAGATTTATTCTGCAGAGAGATTTCTCATTGCCACCGGTGAAAGGCCACGTTATTTGGGTATCCCTGGTGACAAAGAATACTGCATCAGCAGTGATGATCTGTTCTCTTTACCCTATTGCCCGGGTAAGACCCTGGTGGTTGGAGCATCCTACGTTGCTTTGGAATGTGCTGGATTTCTTGCTGGCATTGGTTTAGATGTCACTGTTATGGTACGGTCCATTCTCCTAAGAGGATTTGACCAGGACATGGCCAACAAAATCGGTGAACATATGGAAGAACATGGTATCAAGTTTATAAGACAGTTTGTACCAATAAAAGTTGAACAAATTGAAGCAGGGACACCAGGCCGACTCAGGGTGGTAGCTAAGTCCACTGACAGTGACATAACCATCGAAGGAGAGTATAATACGGTATTGCTGGCAATAGGAAGAGATGCTTGCACAAGGGAAATTGGCTTAGAAAACGTGGGGGTAAAGTTAAATGAACAGACTGGAAAAATACCTGTCACAGATGAAGAGCAGACCAGCGTGCCTTACATCTATGCCATTGGCGATGTGTTAGAGGGGAAGCTGGAGCTCACCCCAGTGGCAATCCAGGCAGGAAGGTTGCTGGTGCAGAGGCTGTATGGGGGCTCCGCTGTCAAGTGTGACTATGACAATGTTCCAACGACCATTTTCACTCCTTTGGAATATGGTGCTTGTGGTCTTTCTGAAGAGAAGGCTGTTTTCCATAGTTACTTTTGGCCATTGGAATGGACGRTTCCATCAAGAGATAACAACAAATGTTATGCAAAAATAGTCTGCAATATCAAAGACAGTGAACGTGTTGTGGGCTTCCACATACTGGGTCCAAATGCTGGAGAAGTTACCCAGGGCTTTGCAGCAGCTCTCAAATGCGGGCTGACCAAAGACCAGCTGGACGGCACCATCGGAATCCACCCCGTCTGCGCAGAGGTATTCACGACACTGTCGGTGACCAAGCGCTCGGGGGGGAACATCCTCCAGACCGGTTGCTGA

Related Sequences

bmy_04812T0 Protein

Length: 589 aa      View alignments
>bmy_04812T0
MPVDEYWLCLPASHVRPFVQTVRVMQSCPCCCWFPGALPSIPEPWCVLAVLPGGSHGAAPPPPFHTAPPSTSQASNSTDPKLCLLSPTSDGRQEKNVQSGLAYQEGXLQNLLKMNGSKDLPESYDYDLIIEAAKYNKKVMVLDFVTPTPLGTTWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEEIVKHDWERMTEAIQNHIGSLNWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAKSTDSDITIEGEYNTVLLAIGRDACTREIGLENVGVKLNEQTGKIPVTDEEQTSVPYIYAIGDVLEGKLELTPVAIQAGRLLVQRLYGGSAVKCDYDNVPTTIFTPLEYGACGLSEEKAVFHSYFWPLEWTXPSRDNNKCYAKIVCNIKDSERVVGFHILGPNAGEVTQGFAAALKCGLTKDQLDGTIGIHPVCAEVFTTLSVTKRSGGNILQTGC*