Part of scaffold_170 (Scaffold)

For more information consult the page for scaffold_170 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000009590 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009086, Bottlenosed dolphin)

Protein Percentage 99.63%
cDNA percentage 99.26%
Ka/Ks Ratio 0.02455 (Ka = 0.0014, Ks = 0.0573)

CHST11 ENSBTAG00000010644 (Cow)

Gene Details

carbohydrate sulfotransferase 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014069, Cow)

Protein Percentage 91.25%
cDNA percentage 89.27%
Ka/Ks Ratio 0.09127 (Ka = 0.0581, Ks = 0.6366)

CHST11  (Minke Whale)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 11

External Links

Gene match (Identifier: BACU000909, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.39%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0429)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 963 bp    Location:1712801..1718466   Strand:+
>bmy_04814
ATGGAAGAGAAAGAAACCACAATACCACATTCCAAAGCCCCTTTGAGTTATTTTCTGTCTCTGCAATTGGATGTAAAACGACGCTGTGAATGCATAGGGACTTCCCTGCTGGAGCTCTCCAACACGGCCGTCCTGCACCAGATGCGGCGGGACCAGGTCACAGACACGTGCCGGGCCAACAGCGCCGTGAGCCGCAAGCGGCGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGATGAGGACCACGAGCTCATCTACTGCTACGTGCCCAAGGTGGCGTGCACCAACTGGAAACGGCTCATGATGGTCCTGACCGGGCGGGGCAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCGCACGTCTCGGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCCGAGATCAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTCGTGCGGGAGCCCTTCGAGAGGCTGGTGTCCGCCTACCGGAACAAGTTCACGCAGAAGTACAACACCTCCTTCCACAAGCGCTACGGCACCAAGATCATCAAGCGACAGCGCAAGAACGCCACGCAGGAGGCCCTGCGCAAGGGCGACGACGTCAAGTTCGAGGAGTTCGTGGCCTATCTCATAGACCCGCACACCCAGCGCGAGGAACCCTTCAACGAACACTGGCAGACCGTCTACTCCCTCTGCCACCCGTGCCACATCCACTATGACCTCGTGGGCAAGTATGAGACGCTGGAGGAGGATTCCAATTACGTCCTGCAGCTGGCAGGCGTGGGCAGCTACCTGAAGTTCCCCACCTACGCCAAGTCCACGAGAACTACTGATGAAATGACCACAGAGTTCTTCCAGAACATCAGCTCAGAGCACCAGACGCAGCTGTACGAAGTCTACAAACTCGATTTTTTAATGTTCAATTACTCAGTGCCAAGCTACCTGAAATTGGAATGA

Related Sequences

bmy_04814T0 Protein

Length: 321 aa      View alignments
>bmy_04814T0
MEEKETTIPHSKAPLSYFLSLQLDVKRRCECIGTSLLELSNTAVLHQMRRDQVTDTCRANSAVSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNTSFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTYAKSTRTTDEMTTEFFQNISSEHQTQLYEVYKLDFLMFNYSVPSYLKLE*