Part of scaffold_166 (Scaffold)

For more information consult the page for scaffold_166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GIPC1 ENSTTRG00000007940 (Bottlenosed dolphin)

Gene Details

GIPC PDZ domain containing family, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007514, Bottlenosed dolphin)

Protein Percentage 93.79%
cDNA percentage 92.86%
Ka/Ks Ratio 0.07253 (Ka = 0.0057, Ks = 0.0789)

GIPC1 ENSBTAG00000000764 (Cow)

Gene Details

PDZ domain-containing protein GIPC1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001013, Cow)

Protein Percentage 99.07%
cDNA percentage 95.98%
Ka/Ks Ratio 0.02185 (Ka = 0.0041, Ks = 0.187)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 972 bp    Location:182210..186320   Strand:+
>bmy_04825
ATGCCGCTGGGACTGGGGCGGCGGAAAAAGGCACCGCCTCTGGTGGAAAATGAGGAGGCGGAGCCAGGCCGTGGTGGGCTGGGCGTGGGGGAGCCGGGGCCCCTGGGCGGAGGTGGGGCAGGGGCCCCCCAAATGGGCTTGCCCCCCCCTCCCCCTGCCCTGCGGCCCCGCCTTGTGTTCCACACCCAGCTGGCCCATGGCAGTCCCACTGGCCGCATCGAGGGCTTCACCAACGTCAAGGAGCTGTACGGCAAGATTGCTGAGGCCTTCCGGCTGCCAGCTGCTGAGGTGATGTTCTGCACCCTCAACACCCACAAAGTGGACATGGACAAGCTCCTGGGGGGCCAGATCGGGCTGGAGGACTTCATCTTCGCCCACGTCAAGGGGCAGCGCAAGGAAGTGGAGGTGTTCAAGTCGGAGGAGGCATTGGGGCTCACCATCACAGACAACGGGGCTGGCTATGCCTTCATCAAGCGCATTAAGGAGGGCAGCGTGATTGACCACATCCAGCTCATCAGCGTCGGTGACATGATCGAGGCCATCAACGGACAGAGCCTGCTGGGCTGCCGGCACTACGAGGTGGCGCGGCTGCTCAAGGAGCTGCCCCGAGGCCGCAGCTTCACGCTGAAGCTCACAGAGCCCCGAAAGGCCTTTGACATGATCAGTGTGCGTTCAGGGGGTGGCTGCCCAGGCTCCGGTCCCCAGCTGGGCACTGGCCGAGGGACCCTCCGGCTCCGATCCCGGGGTCCTGCCACAGTAGAGGATCTGAAGGTGGATGACCTGCTGGAGAGTTACATGGGCATCAGGGACACAGAGCTGGCGGCCACCATGGTAGAGCTTGGAAAGGACAAAAGGAACCCGGACGAGCTGGCTGAGGCCCTGGATGAACGGCTTGGTGACTTTGCCTTCCCGGATGAGTTTGTCTTTGACGTCTGGGGAGCCATTGGGGACGCCAAGGTTGGCCGCTACTAG

Related Sequences

bmy_04825T0 Protein

Length: 324 aa      View alignments
>bmy_04825T0
MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGAGAPQMGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRSFTLKLTEPRKAFDMISVRSGGGCPGSGPQLGTGRGTLRLRSRGPATVEDLKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY*