Sequence detailsbmy_04826 (Coding sequence)

Part of scaffold_166 (SequenceType object (1))

For more information consult the page for scaffold_166 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTGER1ENSTTRG00000007938 (Bottlenosed dolphin)

Gene Details

prostaglandin E receptor 1 (subtype EP1), 42kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007511, Bottlenosed dolphin)

Protein Percentage 96.56%
cDNA percentage 97.54%
Ka/Ks Ratio 0.23549 (Ka = 0.015, Ks = 0.0638)

BT.106423ENSBTAG00000017041 (Cow)

Gene Details

prostaglandin E2 receptor EP1 subtype

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044062, Cow)

Protein Percentage 93.32%
cDNA percentage 91.83%
Ka/Ks Ratio 0.09892 (Ka = 0.0331, Ks = 0.3344)

Additional orthologs identified in other species via the OPTIC pipeline.

PTGER1 (Human)   Ptger1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1224 bp    Location:189642..191467   Strand:+
Raw sequence 
>bmy_04826
ATGAGCCCTTGCGGGCCCCTCAACCTGAGCCTGGCGGGCGAGGCGACCACGTGTACAGCACCCGGGGCCTCCAACGCGTCCGCCGGACCGCTGTCGGACCTGGCAGGCGTGTCGCCCGCGCTGCCCATCTTCTCCATGACGCTGGGCGCCGTGTCCAACGTGCTGGCGCTGGCACTGCTGGCGCAGGCCGCGGGCCGTCTGCGGCGCCGCCGCTCGGCGGCCACCTTCCTGCTGTTCGTCGCCAGCCTGCTGGCCACCGACCTGGCGGGCCACGTGATCCCGGGTGCGCTGGTGCTGCGCCTGTACGCGGCGGGGCGCTCGCCGGCCGGCGGCGCCTGCCACTTCCTGGGCGGATGCATGGTCTTTTTCGGCCTGTGCCCGCTGTTGCTGGGCTGCGGCATGGCCGTGGAGCGCTGCGTGGGCGTCACGCGGCCGCTGCTGCACGCAGCCGGCGTCTCAGTGGCCCGCGCGCGGCTGGCTTTGGCCGCGCTGGCCGCCGTGGCCTTGGCCGTGGCGCTGCTGCCATTGGCGCGCGTGGGCCGCTACGAGCTGCAGTACCCGGGTACGTGGTGCTTCATCGGTCTGGGCCCGGCGGGAGGCTGGCGCCAGTCGTTGCTCGCCGGCCTTTTCGCCGGCCTCGGCTTGGCCTCGCTGCTCGCCGCGCTCGTGTGCAACACGCTCAGCGGCCTGGCCCTGCTGCGCGCCCGCTGGCGCCGCCGCTCTCGACGGCACTTCCCGGCTGGAGGCCCCGACAGCCGCCGTCACTGGGGAGGGAGCGGACCCCGCCCGGCCTCCGCCTCGTCCGCCTCGTCCGCCTCGTCCGTCGCTTCGGCCTCCGCCGCCCCCGGCGGCTCCCTGGGCCGTGGCTCAGCGCGGCGAGCCCGTGCCCACGACGTGGAGATGGTGGGCCAGCTCGTAGGCATCATGGTGGTGTCGTGCATCTGCTGGAGCCCCCTGCTGGTGTTGGTGGTGCTGGCCATCGCGGGCTGGGGCTCCAGCTCCCTGCAGCGGCCACTGTTTTTGGCCGTGCGCCTCGCCTCATGGAACCAGATTCTGGACCCTTGGGTGTACATCTTGCTGCGCCGGGCTGTGCTTCACCAACTGCTTCGCCTCCTGCCTTCAAGGGCAGGTGCGAAGGGCAGCCCCACGGGGCTGGGCCTAACGAGCGCTTGGGAGGCCAACTCGTTGCGCAGCTCCCGGCACAGTGGCCTCAGTCACTTCTAG

Related Sequences

bmy_04826T0 SequenceType object (3)

Length: 408 aa      View alignments
>bmy_04826T0
MSPCGPLNLSLAGEATTCTAPGASNASAGPLSDLAGVSPALPIFSMTLGAVSNVLALALLAQAAGRLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYAAGRSPAGGACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAAGVSVARARLALAALAAVALAVALLPLARVGRYELQYPGTWCFIGLGPAGGWRQSLLAGLFAGLGLASLLAALVCNTLSGLALLRARWRRRSRRHFPAGGPDSRRHWGGSGPRPASASSASSASSVASASAAPGGSLGRGSARRARAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIAGWGSSSLQRPLFLAVRLASWNQILDPWVYILLRRAVLHQLLRLLPSRAGAKGSPTGLGLTSAWEANSLRSSRHSGLSHF*