Sequence details bmy_04841 (Coding sequence)

Part of scaffold_166 (Scaffold)

For more information consult the page for scaffold_166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CC2D1A ENSTTRG00000008365 (Bottlenosed dolphin)

Gene Details

coiled-coil and C2 domain containing 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007929, Bottlenosed dolphin)

Protein Percentage 84.02%
cDNA percentage 85.93%
Ka/Ks Ratio 0.34347 (Ka = 0.0461, Ks = 0.1343)

CC2D1A ENSBTAG00000006068 (Cow)

Gene Details

coiled-coil and C2 domain-containing protein 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007973, Cow)

Protein Percentage 90.28%
cDNA percentage 89.4%
Ka/Ks Ratio 0.17202 (Ka = 0.0582, Ks = 0.3384)

CC2D1A  (Minke Whale)

Gene Details

coiled-coil and C2 domain containing 1A

External Links

Gene match (Identifier: BACU009395, Minke Whale)

Protein Percentage 94.31%
cDNA percentage 95.05%
Ka/Ks Ratio 0.33432 (Ka = 0.0364, Ks = 0.1089)

Additional orthologs identified in other species via the OPTIC pipeline.

CC2D1A (Human)   Cc2d1a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2826 bp    Location:595780..578284   Strand:-
Raw sequence 
>bmy_04841
TGTAGTTTCAGTGCGGCGGGCCCTGCAAGTCCGGTGGCTGCGCTCGGGTTCCGCGGAGCCCAAGGGCCGAGGCGGAAGTGGGTCGGCCAACCGGGGGGCCGAGGGCGCGAGGTCGGCGGTCGCGGGGCGCCAACGAGGGGCGTGGGACTCAGGAAGGGCGCGTGCGCGGCCATAGGCCCCGGGGGAGGCCAGGCCAGGGGTCCGGTGGTCCGAGTATCCAGCCTGGAAGATGCACAAGAGGAAGGGACCCTTCCCACCCTTGGTCTGACTGAACCCCCATTGTTCCCACAGCTGGGCCTGCTAGTTGACCTCTCCCCAGATGGCCTGATGATCCCTGAGGACGGAGTTAACGATCAGGAACTGGAGGCTGAGTTCTTGGCTTTGGTGGGGGGCCGGCCCCAAGCCCTGGAGAAGCTTAAAGGCAAAGGTCCCCTGCCCATGGAGGCCATTGAGAAGATGGCCAGCTTGTGCATGAGAGACCCGGACAAGGAGGAGGAGGAGGGGACGGACGAGGAGGATGTGGAGGCTGATGATGACCTGCTGCCAAAGGCCACAACCCCCAGCCCAGGGTTGGAGGCCACCTTGCAGGAGAGGCTGGCCCTCTACCAGACAGCGATCGAAAGCGCCAGGCAAGCCGGAGATGGTGCCAAGATGCGGCGCTACGACCGGGGGCTTAAGACCCTTGAAAACCTGCTGGCCTCCGTCCAGAAGGGGAAAGCCATCGATGAAGGGGACATCCCGCCGCCTGTGGCTGTGGGGAAGGGCCCAGTGGCTACGCCCAGCCACACCCCAGCACCCAGTCAGCCGGTCCCTACGAACCCACCGGCCCCAGATTCCCGGGTCATCGTGGAGGGTCCTCCTTCAACTGCCCCAGCCTCGTCGCTGGTCTCCGCTAAGCCTCAGCTGCCCTCAGGAAGCCCTAACACCTGCGTTCCCTGCAGCAATACCAAGATGCCATCCGAGCCCACAAGGCTGGCCGAGCCGTGGATGTGGCCGAGCTGCCTGTGCCCCCAGCAGCTCAACAGCCCTGCAGCCCCCACAGCCCAGCCCAAAGCCCCACCTTCAAAGGCACCCCAGTCAGGATCTGCCCCAGCAGCCAAAGCAGCCCCCAAAGGCACATCCACCAGAGCCCAGCAGCAGCTGGCCTTCCTGGAGGGCCGCAGGAAGCAGCTCCTGCAGGCGGCGCTGCGAGCCAAGCAGAAGAATGACATGGAGGGCGCCAAGATGCACCTGCGCCAGGCCAAGGGGCTGGAGCCCATGCTGGAGGCCTCACGCAACGGGCTGCCCGTGGACATCGTCAAGGTGCCGCCCGCCCCTGTCAACAAGGACGACTTCGCCCTGGTCCAGCGGCCCGGCCCAGGTCTGTCTCAGGAGTCTGTCCGGCGCTACGGTGAACTCACCAAGCTCATAAGGCAGCAGCACGAGATGTGCCTGAACCACTCTAACCAGTTCACCCACCTGGGCAACATCGCTGAAACCAGCAAATTTGAGAAGCTGGCGGAGGACTGTAAGCGGAGCATGGAGACCCTGAAGCAGGCCTTTGCCCGGGGTCTCCCCACGCCCACTGCTCGCTTTGAGCAGAGAACCTTCAGCGTCATCAAGATCTTCCCTGACCTTAGCAGCAACGACATGCTCCTGTTCATCGTGAAGGGCATCAACTTGCCCACACCCCCAGGTGAGGGGGCGTCAGGCAGGGGCGGGGCCGTGGGGTCCACCCCTCTGCCCAGCTCTGACCCTCATTTGCCCACAGGGCTGTCCCCCGGTGACCTGGATGTCTTTGTTCGGTTCGACTTCCCCTATCCCAATGTGGAAGAAGCTCAGAAAGACAAGACCAGTGTGATCAAGAATACAGACTCCCCTGAGTTCAAGGAGCAGTTCAAACTCTGCATCAACCGCGGCCACCGTGGCTTCCGAAGGGCCATCCAGACCAAAGGCATCAAGTTCGAAGTGGTCCACAAGGGGGGGCTGTTCAAGACCGACCGGGTCCTGGGCACAGCCCAGCTGAAGCTGGACGCCTTGGAGACAGCATGCGAGGTCCGGGAGATCCTTGAGGTGAGAGGTGGACGTTCGTCTGAACGCTCTGGTATGGCCGTGCCGCTCATGAACATCACCCAGGTCCTGGATGGTCGCAGGCCCACAGGGGGGCGGCTGGAGGTGATGGTTCGGATTCGGGAGCCACTGACGGCCCAGCAGTTGGAGAYGACAACTGAGAGGTGGCTGGTCATCGACCCCGTGCCAGCAGCTGTGCCCACAGTGAGACCCGTGCCATCGGCAGCCCCAGGGAAGGAGGGGGGCTTGGTTCAAGGGGGCCAAGGCTCACAAGACTGGTTCTGTCCTCTGAAGCAGGTTGCTGGGCCCAAAGGGAAAGCCCCTCCCGTGCCTGCTCCTGTGAGGGAGCCAGGGAACAGATCAGCCCGGCCCCTGCATAGTCTCAGCGTGCTGGCCTTCGACCAAGAGCGTCTGGAGCGGAAGATCCTGGCCTTCAGGCAGGCACGGCGGCCGGTGCCCCCCGAGGTGGCCCAGCAGTACCAGGACATCATACAGCGCAGCCAGTGGCAGAGGGCACAGCTGGAGCAGGGGGGCCCCGGCATCCGGCGGGAGTACGTGGCCCACTTGGAGCGGCAACTGCAGTTCTACACAGAGGCCGCCCGGCGCCTGGGCAATGATGGCAGCAGGGAGGCTGCCAAGGAGGCACTGTATAGACGGAACCTGGTCGAGAGTGAGGTGAGAGGCTTGGGTATTGGGGACGGGGTGGGCAGCTGTGGCCATGTCCCCAACCCTGACCCCGGCGGCCTCTCCCCTCAGCTGCAGCGGCTCCGCAGGTGA

Related Sequences

bmy_04841T0 Protein

Length: 942 aa      View alignments
>bmy_04841T0
CSFSAAGPASPVAALGFRGAQGPRRKWVGQPGGRGREVGGRGAPTRGVGLRKGACAAIGPGGGQARGPVVRVSSLEDAQEEGTLPTLGLTEPPLFPQLGLLVDLSPDGLMIPEDGVNDQELEAEFLALVGGRPQALEKLKGKGPLPMEAIEKMASLCMRDPDKEEEEGTDEEDVEADDDLLPKATTPSPGLEATLQERLALYQTAIESARQAGDGAKMRRYDRGLKTLENLLASVQKGKAIDEGDIPPPVAVGKGPVATPSHTPAPSQPVPTNPPAPDSRVIVEGPPSTAPASSLVSAKPQLPSGSPNTCVPCSNTKMPSEPTRLAEPWMWPSCLCPQQLNSPAAPTAQPKAPPSKAPQSGSAPAAKAAPKGTSTRAQQQLAFLEGRRKQLLQAALRAKQKNDMEGAKMHLRQAKGLEPMLEASRNGLPVDIVKVPPAPVNKDDFALVQRPGPGLSQESVRRYGELTKLIRQQHEMCLNHSNQFTHLGNIAETSKFEKLAEDCKRSMETLKQAFARGLPTPTARFEQRTFSVIKIFPDLSSNDMLLFIVKGINLPTPPGEGASGRGGAVGSTPLPSSDPHLPTGLSPGDLDVFVRFDFPYPNVEEAQKDKTSVIKNTDSPEFKEQFKLCINRGHRGFRRAIQTKGIKFEVVHKGGLFKTDRVLGTAQLKLDALETACEVREILEVRGGRSSERSGMAVPLMNITQVLDGRRPTGGRLEVMVRIREPLTAQQLEXTTERWLVIDPVPAAVPTVRPVPSAAPGKEGGLVQGGQGSQDWFCPLKQVAGPKGKAPPVPAPVREPGNRSARPLHSLSVLAFDQERLERKILAFRQARRPVPPEVAQQYQDIIQRSQWQRAQLEQGGPGIRREYVAHLERQLQFYTEAARRLGNDGSREAAKEALYRRNLVESEVRGLGIGDGVGSCGHVPNPDPGGLSPQLQRLRR*