Part of scaffold_166 (Scaffold)

For more information consult the page for scaffold_166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACNA1A ENSTTRG00000011945 (Bottlenosed dolphin)

Gene Details

calcium channel, voltage-dependent, P/Q type, alpha 1A subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011356, Bottlenosed dolphin)

Protein Percentage 86.74%
cDNA percentage 86.94%
Ka/Ks Ratio 0.24919 (Ka = 0.0455, Ks = 0.1825)

CACNA1A ENSBTAG00000014828 (Cow)

Gene Details

voltage-dependent P/Q-type calcium channel subunit alpha-1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019752, Cow)

Protein Percentage 85.33%
cDNA percentage 85.17%
Ka/Ks Ratio 0.18486 (Ka = 0.1005, Ks = 0.5437)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6687 bp    Location:1013101..1134624   Strand:+
>bmy_04847
ATGAAGGCAATGATCCCCCTGCTGCAGATCGGCCTCCTCCTATTTTTTGCAATCCTTATTTTTGCAATCATAGGGTTAGAATTTTATATGGGAAAATTTCATACCACCTGCTTTGAAGAGGGCACAGGGATAAGCTCCTGGAAGGGATCTACAGGGACTCTCTGGATGGTTGCTTTTCTAGAAGCAGCCCTCAGAGTGTTTCGTGATGAGGGGGCAGATGACATTCAGGGTGAGTCTCCAGCTCCGTGTGGGACAGAGGAACCTGCCCGCACCTGCCCCAATGGGACCAAATGTCAGCCCTACTGGGAAGGGCCCAACAATGGGATCACTCAGTTCGACAACATCCTATTTGCAGTGCTGACTGTTTTCCAGTGCATCACCATGGAAGGGTGGACTGACCTCCTCTACAACAGCCAAGCCCGTGGGCATGACCTCACCATCCGCTATCAGAGCAACGATGCCTCAGGGAACACTTGGAACTGGTTGTACTTCATCCCCCTCATCATCATCGGCTCCTTTTTTATGCTGAACCTCGTGCTGGGTGTGCTGTCTGGGGAGTTTGCCAAAGAAAGGGAGCGGGTAGAGAACCGGCGGGCTTTTTTGAAGCTGAGGCGGCAGCAACAGATTGAACGAGAACTCAATGGGTACATGGAGTGGATCTCGAAAGCAGAAGAGGTGATCCTCGCCGAGGATGAAACCGACGGGGAGCAGAGGCATCCCTTTGATGGGTCTCCCTTCGCCCGAGCCAGCATTAAAAGTGCCAAGCTGGAGAACTCAACTTTTTTTCACAAAAAGGAGAGGAGGATGCGTTTCTACATCCGCCGCATGGTCAAAACTCAGGCCTTCTACTGGACTGTGCTCAGTCTGGTAGCCCTCAACACGCTGTGTGTCGCTATCGTTCATTACAACCAGCCCGAGTGGCTCTCCGACTTCCTCTACTATGCAGAATTCATTTTCTTAGGACTCTTTATGTCCGAAATGTTTATAAAAATGTACGGGCTTGGGACGCGGCCTTACTTCCACTCTTCCTTCAACTGTTTTGATTGTGGGGTCATCATCGGGAGCATCTTTGAGGTCATCTGGGCCGTCATAAAACCCGGCACATCCTTTGGAATCAGTGTGTTACGAGCCCTCAGGTTATTGCGTATTTTCAAAGTACTGGGCATCTCTCAGGAACCTGGTCGTCTCTCTTCTCAACTCCATGAAATCCATCATCAGCCTGTTGTTCCTCCTTTTCCTGTTCATCGTCGTCTTTGCCCTTCTGGGAATGCAACTCTTTGGTGGCCAATCCTGACGGGCGAAGACTGGAATGAGGTCATGTACGACGGCATCAAGTCTCAGGGGGGTGTGCAGGGCGGCATGGTGTTCTCCATCTACTTCATCGTGCTGACGCTCTTTGGGAACTACACCCTCCTGAACGTGTTCTTGGCCATCGCAGTGGATAATTTGGCCAACGCCCAGGAGCTCACCAAGGATGAACAAGAAGAAGAAGAGGCAGCCAACCAGAAACTCGCCCTCCAGAAAGCCAAGGAGGTGGCAGAAGTGAGCCCTCTGTCTGCAGCCAACATGTCCATAGCTGTGAAGGAACAACAGAAGAACCAGAAGCCCACCAAGTCCGTGTGGGAGCAGCGGACAAGCGAGATGCGGAAGCAGAACCTGCTGGCCAGCCGGGAGGCGCTGTACAACGAGATGGACCCGGACGAGCGCTGGAAGGCCTCCTACGCCCGGCACCTGCGGCCCGACATGAAGACCCACCTGGACCGGCCGCTGGTGGTCGATCCCCAGGAGAACCGCAACAACAACACCAATAAGAGCCGGGCGGCCGAGCCCACGGTGGACCAGCGCCTCGGGCAGCAGCGAGCCGAGGACTTCCTGAGAAAACAGGCCCGCTACCACGACCGGGCCCGGGACCCCTGCGGCTCCGTGGGCCTGGACACCCGGAGGCCCTGGGCGGGCAGCCAGGAGGCCGAGCTGAGCCGGGAGGGGCCTTACGGCCGCGAGTCGGACCACCACGCCCGGGAGGGCGGCCTGGAGCAGCCGGGGTTCTGGGAGGGCGAGGCGGAGCGGGGCAAAGTCTGCGACCCGCACCGGAGGCACGCCCACCGGCAGGGGTGCAGCCGGGAGAGCCGCAGCGGGTCCCCGCGCACGGGGGCCGACGGGGAGCCCCGCAGGCACCGGGCGCACCGCAGGCCGGGCGACGAGGGCCCAGAAGACAAGGCCGATCGCAGGTCCCGGCACCGCGAGGGCAGCCGGCCGGCCCGGGGCGGCGAAGGCGAGGGCCCAGACGGCGGCGAGCGGAGGAGGCGGCACCGGCTTGGCCCTCCGCCCGCCTACGACGGGGACGCACGCAGGGAGGACAAGGAGCGCAGGCACCGGAGGAGGAAAGAGAACCAGGGCTCCGGGGTCCCCGTGTCGGGCCCCAACCTGTCAACCACCCGGCCGATCCAGCAGGACCTGGGCCGCCAAGACCCACCCCTGGCCGAGGATATTGACAACATGAAGAACAACAAGCTCGCCACCGCAGAGTCAGCAAGTCCCCACGACAGCCTCGGCCATGCCGGCCTGCCCCAGAGCCCGGCCAAGATGGTGAACAGCACCGACCCCAGCCCCACGCCTGCCCCACCTGCCATGGCCATCAACCCCCAGCATGCTTCCAGCCGCCGGACACCCAACAACCCGGGGAACCCGTCCAACCCCGGCCCCCCCAAGACCCCCGAGAACAGCCTTATCGTCACCAACCCCAGCAGCACCCAGACCACCTCAGCTAAGACTGCCAGGAAACCCGACCACACCACGGAAGAGAAGAAAGAGGAGGAGGAAGACGACCCCGGGGAAGACGGCCCCAAGCCCATGCCCCCCTACAGCTCCATGTTTATCCTCTCTACGACCAACCCCCTTCGCCGCCTGTGCCATTACATCCTGAACCTGCGCTACTTTGAGATGTGCATCCTCATGGTCATCGCCATGAGCAGCATCGCCCTGGCGGCTGAGGACCCCGTGCAGCCCAACGCACCACGAAACAATGTGCTGCGATATTTTGACTATGTTTTTACAGGCGTCTTTACCTTTGAGATGGTGATCAAGATGATCGACCTGGGGCTCGTCCTGCACCAGGGTGCCTACTTCCGTGACCTCTGGAACATTCTCGACTTCATAGTGGTCAGTGGGGCCCTGGTGGCCTTTGCCTTCACTGGCAATAGCAAAGGAAAGGACATCAACACGATTAAATCCCTCCGAGTCCTTCGGGCCGTGTTTGACTGTGTTGTGAACTCACTCAAGAATGTCTTCAATATCCTCATCGTCTACATGCTCTTCATGTTCATCTTTGCCGTGGTGGCCGTGCAGCTCTTCAAGGGCAAGTTCTTCCACTGCACCGATGAGTCCAAGGAGTTTGAGAAAGATTGCCGTGGCAAGTACCTCCTTTATGAGAAGAACGAGGTGAAGGCGCGGGACCGAGAGTGGAAGAAGTATGAGTTCCATTATGACAACGTGCTATGGGCTCTGCTGACCCTCTTCACCGTGTCCACGGGAGAAGGCTGGCCACAGGTCCTCAAGCACTCCGTGGATGCCACCTTTGAAAACCAGGGTCCCAGCCCTGGGTACCGCATGGAGATGTCCATCTTCTACGTTGTCTACTTTGTGGTGTTCCCCTTCTTCTTTGTCAATATCTTTGTGGCCTTGATCATCATCACCTTCCAGGAGCAGGGGGACAAAATGATGGAGGAATACAGCCTGGAGAAAAATGAGAGGGCCTGCATTGACTTCGCCATCAGCGCTAAACCCCTAACCCGACATATGCCCCAGAACAAGCAGAGTTTCCAGTACCGCATGTGGCAGTTCGTGTTCTACGGGGCCTCTGTCGCTTATGAAAATGCCCTGAGGGTATTCAACATTGTCTTCACTTCCCTCTTCTCTCTGGAATGTCTTCTCAAAGTCATGGCTTTTGGGATTCTGAATTATTTCCGCGATGCCTGGAACATCTTCGACTTTGTGACTGTTCTGGGCAGCATCACTGACATCCTGGTGACCGAGTTTGGGAATAACTTCATCAACCTGAGCTTCCTGCGCCTCTTCCGAGCRGCCCGGCTCATCAAACTCCTCCGTCAGGGTTACACCATCCGAATTCTTCTCTGGACCTTTGTGCAGTCCTTCAAGGCCCTGCCCTATGTCTGTCTGCTGATTGCCATGCTTTTCTTCATCTACGCCATCATTGGGATGCAGGTGTTTGGCAACATTGGCATCGACGTAGAGGACGAGGATAGTGATGAGGATGAATTCCAAATCACTGAGCACAATAACTTCCGGACCTTCTTCCAGGCCCTCATGCTTCTCTTCCGGAGTGCCACTGGGGAGGCTTGGCACAACATCATGCTTTCCTGCCTCAGCGGTAAACCCTGTGATAAGAACTCTGGCATCCTGACTCATGAGTGCGGCAATGAATTTGCCTATTTTTACTTCGTTTCCTTCATCTTCCTCTGCTCATTTCTGATGCTGAACCTTTTTGTTGCTGTCATCATGGACAACTTTGAGTACCTCACCCGAGATTCCTCCATCCTGGGTCCCCACCACCTGGATGAGTACGTGCGTGTCTGGGCCGAGTACGACCCCGCAGCGTGGGGCCGCATGCCTTACCCGGACATGTATCAGATGCTGAGACACATGTCTCCGCCCCTGGGTCTGGGGAAGAAGTGTCCGGCCAGAGTGGCTTACAAGAGGCTCCTGCGGATGGACCTGCCTGTTGCCGATGACAACACCGTCCACTTCAATTCTACCCTCATGGCTCTGATCCGCACAGCCCTGGATATCAAGATCGCCAAGGGCGGAGCCGACAAACAACAGATGGATGCTGAGCTGCGGAAGGAGATGATGGCCATCTGGCCCAACCTGTCCCAGAAGACGCTGGACCTGCTGGTCACCCCTCACAAGTCCACGGACCTGACGGTGGGGAAGATCTATGCAGCCATGATGATCATGGAGTACTACCGGCAGAGCAAGGCCAAGAAGCTGCAGGCCATGCGCGAGGAGCAGAACCGGACACCTCTCATGTTCCAGCGCATGGAGCCCCCATCTCCAACGCAGGAGGGGGGGCCCGGCCAGAATGCCCTCCCCTCCACCCAGCTGGACCCAGGAGGAGGCCTGATGGCTCACGAAAGCGGCATGAAGGAAAGCCCATCCTGGGTGACCCAGCGGGCCCAGGAGATGTTCCAGAAGACGGGCACGTGGAGCCCGGAGCGAGGACCCCCCACGGACATGCCCAATAGCCAGCCCAACTCTCAGTCTGTGGAGATGCGAGAGATGGGCAGAGACGGCTACTCGGACAGTGAGCACTACCTCCCCATGGAGGGCCAGGCCCGGGCCGCCTCCATGCCCCGCCTCCCCGCCGAGAACCAGACCATCTCAGACACCAGCCCCATGAAGCGCTCGGCCTCCGTGCTGGGCCCCAAGGCCCGGCGCCTGGACGACTACTCCCTGGAGAGGGTGCCACCCGAAGAGAACCAGCGGCACCACCCGCGGCGCAGAGAGCGCAGCCACCGCGCCTCCGAGCGCTCCCTGGGCCGCTACACGGACGTGGACACAGGCTTGGGGACAGACCTGAGCATGACCACCCAGTCTGGGGACCTGCCATCAAAGGACCGAGACCAGGAGCGGGGCCGACCCAAGGACCGGAAGCATCGGCAGCACCATCACCACCACCACCACCACCACCCCCCGCCCCCAGACAAGGAGCGCTACGCCCAGGAGCGGCCTGACCACGGCCGGACCCGGGCCCGGGACCAGCGCTGGTCCCGCTCACCCAGTGAGGGCCGAGAGCACATGGCACACCGGCAGGTGGGTGTGGCAGGAGGTACCCCTGAGCCGAGCCCCTGGGGCCCGGGAGAGGAGGGGGCCTACACCCCACAGCCACTCTGGGCAGGGTCCCCCACTGCTGCTGTGACCTCTGACCCTGTCCACCATGGAGTGGGCTCCCCAAGCCAGGGGGGCAGTAGTTCCGTAAGTGGAAGCCCAGCCCCCTCAACATCTGGTACCAGCACTCCGCGGCGGGGACGCCGCCAGCTCCCCCAGACCCCTTCCACCCCCCGGCCACACGTGTCCTATTCCCCCGTGATCCGTAAGGCCGGCGGCTCGGGTCCCCCGCAGCAGCAGCAGCAGCAGCAGCCGGCGGCACGGCCGGCGACTCCCCAACGGCTACTACCCGGCCCACGGACTGGCCAGGCCCCGCGGGCCGGGCTCCCGGAAAGGCCTGCACGAAACCTACAGCGAGACCGACGACGACGACTGGTGCTAAGCCTGGGCGAGGTGGCACCCGCGCCCGCCCGGCCCCCTCCCACGCACCCCACGCACACGCCCCCCCGCGGAGGAGCCGCACCGGCCGCGGGGCCACCTCGCTGCCACCTGCCCAGCACACGGGGGAGGCCCGGGAGGGCCCAGGAGAGGACCAGCTGGACGGCCCCGGCCTCTGGAGGGAGTCCCCAGGGCCGGGACACACCAGGGTGTCCCGCAAAGACCCTCAGCCGGACAAGCCGCTCCTGGGCAGCTACTGCGCCCCCCACCCAGCCCCGACCCCCACGACGGGGTCCCTCGGGGGCAGACAAACCATACAGCCAAGGGATTCGAATTAACTCAGCCATTTTTGGAGAACCTTGGGGAAAATGGAAATTTCAAAAAAAAAAAAAAAAACATTTTTAA

Related Sequences

bmy_04847T0 Protein

Length: 2229 aa      View alignments
>bmy_04847T0
MKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFEEGTGISSWKGSTGTLWMVAFLEAALRVFRDEGADDIQGESPAPCGTEEPARTCPNGTKCQPYWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSQARGHDLTIRYQSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDGEQRHPFDGSPFARASIKSAKLENSTFFHKKERRMRFYIRRMVKTQAFYWTVLSLVALNTLCVAIVHYNQPEWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFGISVLRALRLLRIFKVLGISQEPGRLSSQLHEIHHQPVVPPFPVHRRLCPSGNATLWWPILTGEDWNEVMYDGIKSQGGVQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAVKEQQKNQKPTKSVWEQRTSEMRKQNLLASREALYNEMDPDERWKASYARHLRPDMKTHLDRPLVVDPQENRNNNTNKSRAAEPTVDQRLGQQRAEDFLRKQARYHDRARDPCGSVGLDTRRPWAGSQEAELSREGPYGRESDHHAREGGLEQPGFWEGEAERGKVCDPHRRHAHRQGCSRESRSGSPRTGADGEPRRHRAHRRPGDEGPEDKADRRSRHREGSRPARGGEGEGPDGGERRRRHRLGPPPAYDGDARREDKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDIDNMKNNKLATAESASPHDSLGHAGLPQSPAKMVNSTDPSPTPAPPAMAINPQHASSRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQTTSAKTARKPDHTTEEKKEEEEDDPGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTIKSLRVLRAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQFVFYGASVAYENALRVFNIVFTSLFSLECLLKVMAFGILNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEDEDSDEDEFQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGILTHECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGGPGQNALPSTQLDPGGGLMAHESGMKESPSWVTQRAQEMFQKTGTWSPERGPPTDMPNSQPNSQSVEMREMGRDGYSDSEHYLPMEGQARAASMPRLPAENQTISDTSPMKRSASVLGPKARRLDDYSLERVPPEENQRHHPRRRERSHRASERSLGRYTDVDTGLGTDLSMTTQSGDLPSKDRDQERGRPKDRKHRQHHHHHHHHHPPPPDKERYAQERPDHGRTRARDQRWSRSPSEGREHMAHRQVGVAGGTPEPSPWGPGEEGAYTPQPLWAGSPTAAVTSDPVHHGVGSPSQGGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQQQQPAARPATPQRLLPGPRTGQAPRAGLPERPARNLQRDRRRRLVLSLGEVAPAPARPPPTHPTHTPPRGGAAPAAGPPRCHLPSTRGRPGRAQERTSWTAPASGGSPQGRDTPGCPAKTLSRTSRSWAATAPPTQPRPPRRGPSGADKPYSQGIRINSAIFGEPWGKWKFQKKKKKHF*