Sequence detailsbmy_04849 (Coding sequence)

Part of scaffold_166 (SequenceType object (1))

For more information consult the page for scaffold_166 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX10ENSTTRG00000006387 (Bottlenosed dolphin)

Gene Details

syntaxin 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006040, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 98.38%
Ka/Ks Ratio 0.92875 (Ka = 0.0166, Ks = 0.0179)

STX10ENSBTAG00000016352 (Cow)

Gene Details

syntaxin-10

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021753, Cow)

Protein Percentage 92.73%
cDNA percentage 93.54%
Ka/Ks Ratio 0.15878 (Ka = 0.035, Ks = 0.2204)

STX10 (Minke Whale)

Gene Details

syntaxin 10

External Links

Gene match (Identifier: BACU009406, Minke Whale)

Protein Percentage 98.18%
cDNA percentage 98.99%
Ka/Ks Ratio 0.4865 (Ka = 0.0084, Ks = 0.0172)

Additional orthologs identified in other species via the OPTIC pipeline.

STX10 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 498 bp    Location:1172313..1174800   Strand:+
Raw sequence 
>bmy_04849
ATGCAGGAGAGAAAGGTGTTTGTGGAGAGGATGCGGGAAGCAGTCCAGGAAATGAAGGACCATATGGTCAGCCCCGCAGCCATAGCCTTCATGGAGAGGAATAATAGAGAGATGCTGACAGGCAAGCCAGCCACCCTGAAGTCATCCAGCGACTTGCTGGACACCAGTGTGGTCTCAACCACCTCTCGCTACATTGAAGAGCAGCAGGCCACACAGCAGCTGATCATGGACCAGCAGGATCAACAGCTGGAAATGGTGTCTGGGAGTATCCAGGTTCTGAAACACATGTCCGGCCGCGTCGGGGAGGAGCTAGATGAGCAGGGCATTATGCTGGACACCTTTGTTCATGAGATGGACCACACCCAGTCCCGGATGGATGGGGTCCTCAGGAAGATGGCCAAAGTATCCCACATGACCAGTGACCGCCGACAGTGGTGTGCCATTGTGGTGCTGCTGGGGGTGCTTCTCCTGGTCCTCATCCTGTTCTTCTCTCTCTGA

Related Sequences

bmy_04849T0 SequenceType object (3)

Length: 166 aa      View alignments
>bmy_04849T0
MQERKVFVERMREAVQEMKDHMVSPAAIAFMERNNREMLTGKPATLKSSSDLLDTSVVSTTSRYIEEQQATQQLIMDQQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDTFVHEMDHTQSRMDGVLRKMAKVSHMTSDRRQWCAIVVLLGVLLLVLILFFSL*