Part of scaffold_166 (Scaffold)

For more information consult the page for scaffold_166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRMT1 ENSTTRG00000006379 (Bottlenosed dolphin)

Gene Details

tRNA methyltransferase 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006035, Bottlenosed dolphin)

Protein Percentage 94.02%
cDNA percentage 94.08%
Ka/Ks Ratio 0.17997 (Ka = 0.0151, Ks = 0.0836)

BT.21089 ENSBTAG00000019325 (Cow)

Gene Details

N(2),N(2)-dimethylguanosine tRNA methyltransferase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025736, Cow)

Protein Percentage 91.48%
cDNA percentage 91.32%
Ka/Ks Ratio 0.166 (Ka = 0.0444, Ks = 0.2673)

TRMT1  (Minke Whale)

Gene Details

tRNA methyltransferase 1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU003994, Minke Whale)

Protein Percentage 93.49%
cDNA percentage 94.63%
Ka/Ks Ratio 0.52047 (Ka = 0.0474, Ks = 0.091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1869 bp    Location:1196409..1205194   Strand:+
>bmy_04851
ATGTTCCGTGCGAGGATCGTTCTGTGGCTAAGCCTGACTCTCCGCTCCGCCCGCAGCTTCTCTAGAGCCCGGTTTATGGAGGGGCAGCCCCAAGGGCCGCCAAATCCAGCGGCAATGGAGAATGGCACCGAACCCTGCGGAGAAGAGCGCCCACCTGAGGTTCAGGAGACGACGGTCACTGAGGGGGCCGCCAAGATCGTCTTCCCCAGCGCAAACGAAGTTTTCTACAATCCAGTGCAGGAGTTCAACCGGGACCTGACATGTGCTGTGATTACCGAGTTTGCTCGCATTCAACTTGGGGCCAAAGGAATCCAGATCAAGGTGCCAGGTGAGAAGGATGTGCAAAAGGTGGTCGTGGACTTGTTGGAGCAAGAGGAGGACAAGGCTGAACTGAAAGAGGGTGCAAACCTGGCCCCGGGAGACCAACCTCGAACAGCTGCCGTGCGGGATATCTGCGAGGAAGGCCTGCGAGTGCTGGAAGGCCTGGCAGCCTCCGGCCTACGTTCCATTCGCTTTGCGCTAGAGGTGCCTGGGCTCCGATCCGTGGTTGCCAATGATGCCTCTGCCCGAGCCGTGGATCTCATGCACCGTAATCACCAGAAGGCATCGGAGCGGTTTGATGTCATTGACCTGGACCCCTATGGCAGCCCCGCCCCCTTCCTGGATGCAGCCGTGCAGGCTGTGAGTGAAGGAGGGCTGCTGTGTGTGACCTGCACAGACATGGCAGTGCTGGCGGGGAACAGTGGGGAGACATGCTACAGCAAGTACGGGGCCATGGCCCTCAAGAGCCGGGCCTGCCACGAGATGCGCTTTGTGGTGCCGCTGCTCAGCATCAGCGCTGACTTCTACGTGCGCGTTTTTGTTCGTGTCTTCACCGGCCAGGCCAAGGTCAAGGCCTCGGCCAGCAAGCAGGCGCTGGTGTTCCAGTGTGTGGGCTGCGGGGCGTTCCACCTCCAGCGCCTTGGCAAAGCATCAGGAGCCTCTGGTGGCCGGGTCAAGTTCTCTGCAGCCTGCGGTCCCCCTGTGGCCCCAGAGTGTGAGCACTGTGGGCAGCGACACCAGCTTGGTGGCCCCATGTGGGCAGAGCCCCTCCACGACCTAGACTTCGTGGGCCGTGTCCTAGAGGCTGTGAGCGCCAACCCTGGCCGCTTCCACACCGCTGAGCGGATCCGTGGGGTCCTGAGCGTCGTCGCTGAGGAGCTCCTGGATGTACCTCTCTACTACACGCTGGACCAGCTCAGCAGCACCATCCACTGCAGCACGCCCAGGCTCCTGCAGCTGAGGTCTGCCCTCCTCCATGCTGGCTTCCGGGTCTCCCTCTCCCACGCCTGTAAGAATGCCGTGAAGACGGACGCCCCCTCCTCGGCCCTCTGGGACATCATGCGCTGCTGGGAGAAGGAGTGTCCGGTGAAGCGGGAGCGCCTGTCGGAGACCAGTCCGGCATTCCGCATTCTCAGTGTGGAGCCCAGGCTGCAGGCCAACTTCACCATCCGGGACGATGCCAACCCCAGCTCCCGCCAGCGAGGACTCAAGCGCTTCCAGGCCAACCCCGAGGCCAACTGGGGTCCCCGGCCCCGCGCCCGGCCAGGAGGCAAGGCAGCAGGCGAAGCTATGGAAGAGAGACGCAAGCTGCTCCAAAATAAGCGAAAGGAGCCGGATGAGGACCTGGCCCAGCGGGCTGCCCAGCTCAAGACATTTCCCTGCAAGAGGTTCAAGGAGGGCACCTGTCAGCGGGGGGACCAGTGCTGCTACTCGCATAGCCCCCTGACACCCAAGGCCACTGCTGAAGCCACCCCCACTGACCGTCCAGAGGCCCCCGATCAGAACCCCCTTGGACCTGGGGCTGCTGCTGGTCCAGGCAAAGACTGA

Related Sequences

bmy_04851T0 Protein

Length: 623 aa      View alignments
>bmy_04851T0
MFRARIVLWLSLTLRSARSFSRARFMEGQPQGPPNPAAMENGTEPCGEERPPEVQETTVTEGAAKIVFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDVQKVVVDLLEQEEDKAELKEGANLAPGDQPRTAAVRDICEEGLRVLEGLAASGLRSIRFALEVPGLRSVVANDASARAVDLMHRNHQKASERFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLGKASGASGGRVKFSAACGPPVAPECEHCGQRHQLGGPMWAEPLHDLDFVGRVLEAVSANPGRFHTAERIRGVLSVVAEELLDVPLYYTLDQLSSTIHCSTPRLLQLRSALLHAGFRVSLSHACKNAVKTDAPSSALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIRDDANPSSRQRGLKRFQANPEANWGPRPRARPGGKAAGEAMEERRKLLQNKRKEPDEDLAQRAAQLKTFPCKRFKEGTCQRGDQCCYSHSPLTPKATAEATPTDRPEAPDQNPLGPGAAAGPGKD*