Sequence detailsbmy_04859 (Coding sequence)

Part of scaffold_166 (SequenceType object (1))

For more information consult the page for scaffold_166 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CALRENSTTRG00000003600 (Bottlenosed dolphin)

Gene Details

calreticulin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003375, Bottlenosed dolphin)

Protein Percentage 97.84%
cDNA percentage 97.2%
Ka/Ks Ratio 0.14003 (Ka = 0.0118, Ks = 0.084)

CALRENSBTAG00000015114 (Cow)

Gene Details

calreticulin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020111, Cow)

Protein Percentage 95.44%
cDNA percentage 92.49%
Ka/Ks Ratio 0.05893 (Ka = 0.0219, Ks = 0.3719)

CALR (Minke Whale)

Gene Details

calreticulin

External Links

Gene match (Identifier: BACU003990, Minke Whale)

Protein Percentage 99.04%
cDNA percentage 98.56%
Ka/Ks Ratio 0.10644 (Ka = 0.0044, Ks = 0.0411)

Additional orthologs identified in other species via the OPTIC pipeline.

CALR (Human)   Calr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1254 bp    Location:1349458..1345968   Strand:-
Raw sequence 
>bmy_04859
ATGCTGCTACCCGAGCTGGTGCTGCTCGGCCTTCTTGGCCTGGCCGCCGCTGAACCCGTCATTTACTTCAAGGAGCAGTTTCTGGACGGAGACGGGTGGACTGAGCGCTGGATCGAATCCAAACACAAACCGGATTTTGGTAAATTCGTTCTCAGTTCCGGCAAGTTCTACGGTGACCAGGAGAAAGATAAAGGGCTGCAGACAAGCCAGGATGCCCGGTTTTACGCCCTGTCGGCCAGATTCGAGCCTTTCAGCAATAAGGGTCATACACTGGTGGTGCAGTTCACCGTGAAACACGAACAGAACATCGACTGTGGGGGCGGCTACGTGAAGCTATTTCCAGATGGTCTGGACCAGACAGACATGCATGGAGACTCTGAATACAACATCATGTTTGGCCCGGACATCTGTGGCCCTGGCACCAAGAAGGTTCATGTCATCTTTAACTACAAGGGCAAGAACGTGCTGATCAACAAGGATATCCGTTGCAAGGACGATGAATTCACACACCTATACACGCTGATTGTGCGGCCTGATAATACTTATGAGGTAAAGATTGACAACAGCCAGGTGGAGTCAGGCTCCTTGGAGGACGATTGGGATTTCTTGCCTCCCAAGAAGATAAAGGATCCTGATGCTGTAAAGCCTGAAGACTGGGAYGAGCGAGCCAAGGTTGATGACCCTACAGACTCCAAGCCTGAGGACTGGGACAAGCCTGAGCACATTCCTGACCCCGATGCTAAGAAGCCCGAGGACTGGGATGAAGAGATGGACGGAGAGTGGGAACCACCAGTGATTCAGAACCCAGAGTACAAGGGTGAGTGGAAGCCCCGGCAGATTGACAACCCAGATTACAAGGGCATTTGGATCCACCCAGAGATCGACAACCCTGAGTATTCCCCTGATAGCAACATCTACGCCTATGAAAACTTTGCTGTACTGGGCTTGGATCTATGGCAGGTCAAGTCTGGCACCATCTTTGACAACTTCCTCATCACCAACGACGAAGCATATGCTGAGGAGTTTGGCAACGAGACGTGGGGTGTTACGAAGGCAGCAGAAAAACAAATGAAGGACAAGCAAGACGAAGAGCAGAGGCTAAAGGAGGAGGAGGAGGAGAAGAAGCGCAAGGAAGAGGAGGAGGCAGACAAGGAAGATGAGGAGGACAAGGAGGAGGATGAGGAGGATGAGGATGAGAAAGAGGAAGAGGAGGAGGAAGACGCTGCCGCCGGCCAGGCCAAGGATGAGCTGTAG

Related Sequences

bmy_04859T0 SequenceType object (3)

Length: 418 aa      View alignments
>bmy_04859T0
MLLPELVLLGLLGLAAAEPVIYFKEQFLDGDGWTERWIESKHKPDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGHTLVVQFTVKHEQNIDCGGGYVKLFPDGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAVKPEDWDERAKVDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGIWIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEEKKRKEEEEADKEDEEDKEEDEEDEDEKEEEEEEDAAAGQAKDEL*