Sequence detailsbmy_04871 (Coding sequence)

Part of scaffold_166 (SequenceType object (1))

For more information consult the page for scaffold_166 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BEST2ENSTTRG00000003586 (Bottlenosed dolphin)

Gene Details

bestrophin 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003361, Bottlenosed dolphin)

Protein Percentage 95.53%
cDNA percentage 97.35%
Ka/Ks Ratio 0.3319 (Ka = 0.0193, Ks = 0.0582)

BEST2ENSBTAG00000025652 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003818, Cow)

Protein Percentage 90.94%
cDNA percentage 90.81%
Ka/Ks Ratio 0.10383 (Ka = 0.0422, Ks = 0.4064)

BEST2 (Minke Whale)

Gene Details

bestrophin 2

External Links

Gene match (Identifier: BACU003980, Minke Whale)

Protein Percentage 99.02%
cDNA percentage 99.02%
Ka/Ks Ratio 0.09314 (Ka = 0.0033, Ks = 0.0355)

Additional orthologs identified in other species via the OPTIC pipeline.

BEST2 (Human)   Best2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1725 bp    Location:1478577..1474702   Strand:-
Raw sequence 
>bmy_04871
ATGACCGTCACGTACACAGCTTGCGTGGCGAACGCGCGCTTCGGCGGCTTCTCGAAGCTGCTGCTGTTGTGGCGCGGGAGCATCTACAAACTTCTGTGGCGCGAGCTGCTGTGTTTCCTTGGGCTCTACATGGCGCTGAGTGCCGCCTATCGCTTTGTGCTGACCGAAGAGCAGAAGCGCTACTTTGAGAAGCTCGTTCTTTACTGCGACCAGTACGCCAGTCTCATCCCGGTCTCTTTTGTCCTCGGCTTCTACGTAACGCTGGTGGTGCACCGCTGGTGGAACCAGTACCTATGCATGCCCCTGCCCGACGCGCTCATGTGCGTGGTGGTCGGCACAGTGCACGGGCGCGACGAGCGCGGCCGCCTCTACCGACGCACTCTCATGCGCTATGCAGGGCTCTCTGCTGTGCTTATCCTGCGCTCTGTCAGCATCGCTGTCTTCAAGCGCTTTCCCACCATAGACCATGTGGTGGAAGCAGGGTTTATGACCCGCGAGGAGCGCAAGAAGTTCGAGAACCTGAACTCATCCTACAACAAGTACTGGGTGCCTTGCGTCTGGTTCTCCAACCTGGCGGCGCAGGCTCGGCGCGAGGGCCGCATCCGCGACAACGGCGCCCTTAAGCTGCTGCTGGAGGAGCTGACTGTGTTTCGGGGCAAGTGTGGGATGCTCTTTCACTACGACTGGATTAGCGTACCCCTTGTCTACACCCAGGTGGTGACCATCGCTGTGTACAGCTACTTCCTGGCCTGCCTCATCGGTCGCCAGTTTCTGGACCCGGCGCAGGGCTACAAAGACCACGACCTGGACCTGTGCGTGCCCATCTTCACCCTGCTGCAGTTCTTCTTCTACGCGGGCTGGCTCAAGGTAGCTGAGCAGCTCATCAACCCCTTCGGAGAGGACGACGATGACTTTGAGACCAACTTTCTGATCGACCGCAACTTCCAAGTGAGACTCTCTCAGTTAAGACCATCCCTGGGCTCCCAAAGCGGCCCTGGCCCCACCCCTGCTAAGACTCGCTCAGACATCGCCCCTGATCCATCCTTCTCTCTTTGGTCACCACACTCCTACCCATCCACAGGGGTCCACCCTGCGGTGCCGGCGCTTTTCCATGCCCCACTCTTCCCCGCGTATCCTCGCCCGCAGGTGTCAATGCTGGCCGTGGACGAGATGTACGACGACCTGGCCATGCTGGAGAAAGACCTGTACTGGGACGCATCTGAGGCTCGCGCTCCCTACACCGCGGCCACCGCCTTCCTGTTGCAGCAGCCCTCCTTCCAGGGCTCCACCTTCGACATCACGCTGGCCAAGGAGGACATGCAGTTCCAGCGGCAGGACGGCGTGGATGCGCCGCTGAGCGATGCACACGGCGACTTCCTGCAGCGCCTCCTGCCGGTGGGCGCGGGCATGGCCGCTGGAGGCCTGCTGGGCCGGCGCCTGTCTTTACTGCGCCGCAAGAACAGCTGCGTGTCGGAGGAATCCACAGCCGCCAGCTGCGCATGCGCGGGCGCCCCTSATGGCGCGGCCCCAGAGTGCAGTTGCGGTGACCCGCTGCTAGACTTAGGCCTGCCGGAGCCGGAGTCTGAGCCCCACGCCGGCCACGAGCCGCCAGCCCCCGGGCCACCCGCCGAGCCCTTCACCGTTGTGCCAATGCCCGGGCCCCGGGGGCCCGCTCCACCCTGGCTGCCCAGCCCCATTGGCGAGGAGGAGGAGAGTCTAACCTAA

Related Sequences

bmy_04871T0 SequenceType object (3)

Length: 575 aa      View alignments
>bmy_04871T0
MTVTYTACVANARFGGFSKLLLLWRGSIYKLLWRELLCFLGLYMALSAAYRFVLTEEQKRYFEKLVLYCDQYASLIPVSFVLGFYVTLVVHRWWNQYLCMPLPDALMCVVVGTVHGRDERGRLYRRTLMRYAGLSAVLILRSVSIAVFKRFPTIDHVVEAGFMTREERKKFENLNSSYNKYWVPCVWFSNLAAQARREGRIRDNGALKLLLEELTVFRGKCGMLFHYDWISVPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVRLSQLRPSLGSQSGPGPTPAKTRSDIAPDPSFSLWSPHSYPSTGVHPAVPALFHAPLFPAYPRPQVSMLAVDEMYDDLAMLEKDLYWDASEARAPYTAATAFLLQQPSFQGSTFDITLAKEDMQFQRQDGVDAPLSDAHGDFLQRLLPVGAGMAAGGLLGRRLSLLRRKNSCVSEESTAASCACAGAPXGAAPECSCGDPLLDLGLPEPESEPHAGHEPPAPGPPAEPFTVVPMPGPRGPAPPWLPSPIGEEEESLT*