Sequence details bmy_04885 (Coding sequence)

Part of scaffold_162 (Scaffold)

For more information consult the page for scaffold_162 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX9 ENSBTAG00000006323 (Cow)

Gene Details

sorting nexin-9

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008296, Cow)

Protein Percentage 83.69%
cDNA percentage 84.71%
Ka/Ks Ratio 0.25405 (Ka = 0.1135, Ks = 0.4467)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX9 (Human)   Snx9 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location:60844..25231   Strand:-
Raw sequence 
>bmy_04885
ATGAAGACATTGAAGGAAAGCTGGAAGAAAGTAGAGAAGAGGCATGGACTGTTGTGTGACCAGATGCCTGCAGTTAAGGGACAGAAGGGTTATTGGGAGTTGAAAGCAAAGGAGCCAGAGGCCGAAGTACAGGCAGGGTGGGTTCAGAGAGAAGCAGACCATGAAGGCTTTGTCAGCAGTGGCAATGACCCCTGGTCAGCCTGGAATGCTTCCAAATCTGGAAACTGGGAAAGCTCGGATGGCTGGGGAGCCAAGCCCGAGGGGACTGCAGCCCAAAGAAACACCTCCAACAACTGGGACACTGCCTTTGGTCATCCCCAGGCCTACCAGGGACCAGGTGAGGAAGAGGGCTCTGCTGGTGATGGAGCCCACCCACCCTTAAAGGGCATCGGAGTTAAAATAGATTTAATCAAAGGAACTGTTCTCAGATTTCCTGGATTTGCAAAACCTGGAATGGAACAGTATTTGTTGGCCAAGCAACTAGCAAAACCCAAAGAGAAAATTCCTATCATTGTTGGAGATTATGGCCCAATGTGGGTTTATCCTACCTCTACATTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTACGGTCTGAAGAGCTACATTGAATATCAGTTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGAGCGTCTACTGGTAAAGTTTGGGTCAGCCATTCCAATCCCTTCTCTTCCAGATAAGCAAGTCACAGGTCGCTTTGAAGAAGAGTTTATCAAGATGCGCATGGAGAGACTTCAGGCGTGGATGACCAGGATGTGTCGTCACCCAGTAATCTCAGAAAGTGAGGTTTTCCAGCAATTTCTAAATTTCCGAGATGAAAAGGAATGGAAAACTGGGAAAAGGAAGGCTGAGAAAGATGAGCTGGTGGGAGTTATGATATTTTCCACCATGGAACCAGAGGCACCTGACCTGGACTTAGTAGAAATAGAACAGAAGTGTGATGCTGTCGGTAAATTCACCAAAGCCATGGATGATGGTGTGAAGGAGCTGCTAACCGTGGGGCAGGAGCACTGGAAGCGRTGCACAGGACCATTACCCAAGGAATATCAGAAGATAGGCAAGGCCTTGCAGAGCTTAGCAACAGTCTTCAGCTCTAGTGGTTATCAAGAAGCAGGAAAGACTTACGAAGAAATTGCCAGTCTTGTGGCAGAACAGCCAAAGAAAGATCTCCATTTCCTGATGGAATGTAATCATGAATATAAAGGTTTCCTTGGCTGCTTCCCTGACATTATTGGCGCTCACAAGGGAGCGATAGAAAAAGTGAAAGAAAGTGATAAACTTGTTGCAACTAGTAAGATCACGCCACAGGACAAACAGAACATGGTGAAACGTGTTGGGACAATGTCTTATGCTTTGCAAGCTGAGATGAATCACTTCCACAGTAACCGGATCTACGACTACAACAGCGTCATCCGCCTGTACCTGGAGCAGCAGGTGCAGTTCTACGAGACGATTGCGGAGAAGCTGAGGCAGGCCCTCGGTCGCTTCCCGGTGATAAAGAAAGAAAGAAAGAAAGAAAACCAAAAAGAAATAGAGTTGGAAAAAACTGCATTTCCTTTATTAAGCGCCTAA

Related Sequences

bmy_04885T0 Protein

Length: 546 aa      
>bmy_04885T0
MKTLKESWKKVEKRHGLLCDQMPAVKGQKGYWELKAKEPEAEVQAGWVQREADHEGFVSSGNDPWSAWNASKSGNWESSDGWGAKPEGTAAQRNTSNNWDTAFGHPQAYQGPGEEEGSAGDGAHPPLKGIGVKIDLIKGTVLRFPGFAKPGMEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAEKDELVGVMIFSTMEPEAPDLDLVEIEQKCDAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGAHKGAIEKVKESDKLVATSKITPQDKQNMVKRVGTMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALGRFPVIKKERKKENQKEIELEKTAFPLLSA*