Sequence detailsbmy_04891 (Coding sequence)

Part of scaffold_159 (SequenceType object (1))

For more information consult the page for scaffold_159 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SP110ENSTTRG00000009274 (Bottlenosed dolphin)

Gene Details

SP110 nuclear body protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008804, Bottlenosed dolphin)

Protein Percentage 70.96%
cDNA percentage 77.04%
Ka/Ks Ratio 0.88941 (Ka = 0.1435, Ks = 0.1614)

SP110ENSBTAG00000015752 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020915, Cow)

Protein Percentage 72.49%
cDNA percentage 83.86%
Ka/Ks Ratio 0.66879 (Ka = 0.167, Ks = 0.2497)

SP110 (Minke Whale)

Gene Details

SP110 nuclear body protein

External Links

Gene match (Identifier: BACU010961, Minke Whale)

Protein Percentage 93.91%
cDNA percentage 96.86%
Ka/Ks Ratio 0.98978 (Ka = 0.0312, Ks = 0.0315)

Additional orthologs identified in other species via the OPTIC pipeline.

SP110 (Human)   Sp110 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1977 bp    Location:171871..132779   Strand:-
Raw sequence 
>bmy_04891
ATGGCAGTTACAAGAAAAGAAGAAGAAGCCTGGCCCTCACCGCGCGTGGCAAAGCACAGACTTCCTGTTTCGCCCCCTGGTATCTCCCTGCCCTTCTCCCAGTCTCCCAGGAGCCATCCCCGGGCAGCCCCTGGACCCGGAAGGGGGCAGGAACAGATAGCAATCTCAGCATCCAGGAGATTCACCATGACCAGGGCCTTGAAAGAGGCTCTTCTACAGCACTTTATACATCAGAAGCTGGAGATTGCTTATGCCATAAACAAGCCATTTCCCTTCTTCGAAGGCCTCCGAGACAACTTCTTCATCACCGAGAGCCTGTACCAGGAATCTCTGGAAGCCTGTAGAAATCTGGTCCCTTTATCCAGGGTCGTGTACAACATCCTCACTCAACTGGAGAATACGTTTAGTCTGTCACTTCTGGAGTTGTTGTTCAGCCGAATAAACCTGAGTGAATACCCCAACTTGATGACGACTCTCAAGAGCTTCAAAAGGGTTGTCATTTCCAACGGAGGGTGGAGCAGAATCACAGCGATTCCTCTCGAAGCCGCAGCCACCCCAGCAGGAAGGAGCTCCCTCTGGGCACTGCTGCCGCTGCCCACCTGCCCACACCCCCCACTGAGCCTCCCGCCCTGCTCACCCAGTGTCAGCGAGCCCGGAGCACCTGCCCAGCCCAGCGCTGAGATCCTGCAAGAGCAGCCCAGCCCTGCTGGCCTCACCGTGGCTCTCCCCGGAACCATCCAGGAAGGAAGGCTCACTCCAGTGTCCAGTGACAACCTGATCCCCCAAATAAAAGATAAAGAAGACACTCAAGAGATGTCCTGCGCTGCATCAGGCCCCGTGCCAGTGATAAGAGATGATGCTCCTGAACCAAGTGACCCAAAGGAGCTCCAAGAGGCATCCAGGGCACCTCCCAGCAAGAAAGGAAAGAAGAGAAAAAGAAATATCTGGTTAACCTCAAAGAAGAGACGCCAGAAAAAAAGCCTCCCGAGAGGGGCAGCCTTACCTGGGCATGGAACCCAAAAGACRCTCCAAGTGGCAGAGCAGGTGACTCCCAGGGAGGACGACTCAACCAGGAACACAAAGGTCACGACAAGAGCAAAAAAGAGAAGGACAGAATGTGCCCAAACGCCTGCACCAGAGGAGGTCARTGATGGCACTTCAGAGATGGATGAAGGAAAGAGACCCCAGGAGCCACCCAGCACACCACCAAGACTCACCCACGGTAAAGGAAGGAAGAGAAAAATACATAGCTGGTCAAGTTCAAAAAACAGACAGAAAAAAAGTCTCCCAAGAGGGTCAGCCTTACCTGGACGCAGAACCCAAGAGATGCTCCAAGAGGTGGATCAGGTGACTGAAAGGAAGGACGACTCAACCAGAAGTTCGAAGGTCATGACACGGGCCCAGAAAGCAAGGGCTGAACGTGCCCAAAAGCCTGCACCAGAGAAAAAGAAAAGGATAAAAGATGTCTGTTCGAGCGCAGCAACAAGTTGTCAGAGAAATATTCCCATTAAGGAAAAACCCAAAGATGAAACTCTGGATTTTCACTCTCCTAAACTTCCTGTGACCTGTGGTGAGGCAAAGGGGATTTTATATAAGGAGAAAATGAAACAAGGCTCCTCAGAGAAGTGTATTCGGAACGAGAAGGGACTTTGGTTCACACCAAGAGAATTTGAAATTGAAGGAAAACGGAAACAATCAAAGAACTGGAAGCGGAGTGTGCTTTGCAGAGGAAAGACCCTAGAACAGCTGCTGGAGAAAGGACTTTTGCTCTGTCCTCCAAGAAGAAGTCTCAAGAGAGAGTCGTCATGTTGCCGACTTTCTGTGTCCCAAGGCTTGCCTGGGAGTTCTCGACTTTCCCAGCCTCAAGTCACCTTCCCATTTCAGCACTGCATCTTCATGACAACTGCTTTAGCACACTGGTACATGTACATGCCACCATTATTTTCAAAGTTAATTTTAAGATGGGGAAGCAAATAA

Related Sequences

bmy_04891T0 SequenceType object (3)

Length: 659 aa      View alignments
>bmy_04891T0
MAVTRKEEEAWPSPRVAKHRLPVSPPGISLPFSQSPRSHPRAAPGPGRGQEQIAISASRRFTMTRALKEALLQHFIHQKLEIAYAINKPFPFFEGLRDNFFITESLYQESLEACRNLVPLSRVVYNILTQLENTFSLSLLELLFSRINLSEYPNLMTTLKSFKRVVISNGGWSRITAIPLEAAATPAGRSSLWALLPLPTCPHPPLSLPPCSPSVSEPGAPAQPSAEILQEQPSPAGLTVALPGTIQEGRLTPVSSDNLIPQIKDKEDTQEMSCAASGPVPVIRDDAPEPSDPKELQEASRAPPSKKGKKRKRNIWLTSKKRRQKKSLPRGAALPGHGTQKTLQVAEQVTPREDDSTRNTKVTTRAKKRRTECAQTPAPEEVXDGTSEMDEGKRPQEPPSTPPRLTHGKGRKRKIHSWSSSKNRQKKSLPRGSALPGRRTQEMLQEVDQVTERKDDSTRSSKVMTRAQKARAERAQKPAPEKKKRIKDVCSSAATSCQRNIPIKEKPKDETLDFHSPKLPVTCGEAKGILYKEKMKQGSSEKCIRNEKGLWFTPREFEIEGKRKQSKNWKRSVLCRGKTLEQLLEKGLLLCPPRRSLKRESSCCRLSVSQGLPGSSRLSQPQVTFPFQHCIFMTTALAHWYMYMPPLFSKLILRWGSK*