Sequence detailsbmy_04892 (Coding sequence)

Part of scaffold_159 (SequenceType object (1))

For more information consult the page for scaffold_159 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SP140ENSTTRG00000009293 (Bottlenosed dolphin)

Gene Details

SP140 nuclear body protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008817, Bottlenosed dolphin)

Protein Percentage 71.11%
cDNA percentage 78.6%
Ka/Ks Ratio 1.16024 (Ka = 0.1671, Ks = 0.144)

BT.59240ENSBTAG00000009664 (Cow)

Gene Details

nuclear body protein SP140

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012738, Cow)

Protein Percentage 46.5%
cDNA percentage 62.92%
Ka/Ks Ratio 0.77042 (Ka = 0.5294, Ks = 0.6871)

SP140 (Minke Whale)

Gene Details

SP140 nuclear body protein

External Links

Gene match (Identifier: BACU010962, Minke Whale)

Protein Percentage 95.36%
cDNA percentage 97.12%
Ka/Ks Ratio 0.92397 (Ka = 0.0289, Ks = 0.0313)

Additional orthologs identified in other species via the OPTIC pipeline.

SP140 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1779 bp    Location:182220..242969   Strand:+
Raw sequence 
>bmy_04892
ATGATCACAGGGGACCAGAACCCAGAGGAGCAGAACCCAGAGGTGCAGTTTTTCTATGAGTTCATATTCAGGCTCTTCAAAGAAAATAAGGTGGAGATTGCAAGTGCAATAACAAAGCCGTTTCCTTTCCTCATGGGCCTCCGAGATCGGGGCTTCATCCCTGAGCAGATGTACAAGCATTTTCAAGAAGCTTGTGGAAATCTGGTCCCGGTGGAAAGAGTGGTGTATGATGCTCTCAGTGAACTGGAGAAGAAATTTGACAAGACAATTCTGGATGCCCTGTTCAGCAGAGTTAACCTGAAGGCCTATCCTGATTTACTTCAGATTTGCAGAAACTTCCAAAATGTGATTCATGAAAACTTCCATTACCAAACCGTTGGTGAAGGAGAGACAAAGGAGACATTCAACTTACAATTAAACCGTGAACAAGTGTCCTTGGAACAGTCACCTCTCCAAATGAACAATGTAATGAGGTTAGAAGATGTACCCAGCTTACTGCCATATGACAGACGAGTTTCCTGTGAGCACAAAGCTCTTCAAAGTACAAACGAAGGCAAGTCTGAAGAGATTCCCAAACTGCAAGCAGAGGACAACAATGCCTGTTGGGAGGTCTGTGACAAAGAAGAGCCCCAGGAAGCCTCGAGCTCCCCACCAAGATGTGAGTCAGTGTCCTGTGATCCTGAAGCTTCCCAAATGACCAACGAAGAAGAACCAGAGGAGCTGCCTAGTCAACCACTATGTGATGGAGAAGGAGCAGAGCTACCAACATTTGGAAATGAGAAGTGTTCCTGTGTTATGTGTTTCTCAAAAGATGTGCCAGGAGGTCCAGAAGGAAGTACTGAAAGTAAAGAAGGTAGTGACATGATGGATACTGTGGATCTTGGAAACAACTCTACTTTGGGAAAACTCAAGAGGAAAAGAAAAAAAAAGAAAGGGCATTCCTGGACAAGAGTAAAAATGAAATATCAGAGAAACATACATCAAAAAGACAACAGCAACGCTGCTGGCCAACTGGCCTCGAGTGGAAAGAAGGTGAAAAGGCATCTGCAGGACCCTGTCAAAATCAGGCGGAGAAGGAGAGGCAGACAGAGACTCCACTTAACTCATAGTGGCAGAGCCCTACAGAAAAAAGTTAAGTCAAGAGGGCAAAGAAAGCACAGATATGAAAAAGTGGATTTTCACTCTCAGATACTTCCTGTGACCTGTGGTAAGGTGAAGGGGATGTTACATAAGAAGAAATTGGAAGAAGGAGTCTTGGTGAAGTGTATACAGAGTGAGAATGGAGACTGGTTCACCCCCAGGGAATTTGAAATCAGAGGAGGCCACGAAAGATCCAAGAACTGGAAGATAAGCGTTCGCTGTAGTGGGATGCCCCTACGTTGGCTGATCGAGAAAGGAGTACCGAAGTCTCACGACAATACTTTAGATAACCTTTGTGAGCCCGTGGAGTTGCACCTTCTGCAGGATGAAGGAGTCTTCTGGAAGCCAGCAGTGTCTCGGGGAATCTGGGGTCCTGGCAAGGCAGATGCAGCCCGAGGAGCAGTTGGTGAGTCGGATGGGAACCCCAAGTCTTCCCCTTTCCCCTCACATAAATGTGAGTTCCTCCTCTTGAAGGTCTATTGTCATACAGAGAGCACCTTTTTTGCGAAGATTCCATACTACTATTATATTAAAGAGGCTTCTGAAAACCTAAAGGAACCCATGTGGTTGGACAAGATCAAGAAGAGGCTGAATGAGCAGGGTTACTCCCACGTGGAGGGTTCAACGACTTTGGCCTAA

Related Sequences

bmy_04892T0 SequenceType object (3)

Length: 593 aa      View alignments
>bmy_04892T0
MITGDQNPEEQNPEVQFFYEFIFRLFKENKVEIASAITKPFPFLMGLRDRGFIPEQMYKHFQEACGNLVPVERVVYDALSELEKKFDKTILDALFSRVNLKAYPDLLQICRNFQNVIHENFHYQTVGEGETKETFNLQLNREQVSLEQSPLQMNNVMRLEDVPSLLPYDRRVSCEHKALQSTNEGKSEEIPKLQAEDNNACWEVCDKEEPQEASSSPPRCESVSCDPEASQMTNEEEPEELPSQPLCDGEGAELPTFGNEKCSCVMCFSKDVPGGPEGSTESKEGSDMMDTVDLGNNSTLGKLKRKRKKKKGHSWTRVKMKYQRNIHQKDNSNAAGQLASSGKKVKRHLQDPVKIRRRRRGRQRLHLTHSGRALQKKVKSRGQRKHRYEKVDFHSQILPVTCGKVKGMLHKKKLEEGVLVKCIQSENGDWFTPREFEIRGGHERSKNWKISVRCSGMPLRWLIEKGVPKSHDNTLDNLCEPVELHLLQDEGVFWKPAVSRGIWGPGKADAARGAVGESDGNPKSSPFPSHKCEFLLLKVYCHTESTFFAKIPYYYYIKEASENLKEPMWLDKIKKRLNEQGYSHVEGSTTLA*