Part of scaffold_159 (Scaffold)

For more information consult the page for scaffold_159 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000047932, Cow)

Protein Percentage 68.2%
cDNA percentage 79.98%
Ka/Ks Ratio 0.6041 (Ka = 0.2143, Ks = 0.3548)

SP100  (Minke Whale)

Gene Details

SP100 nuclear antigen

External Links

Gene match (Identifier: BACU010963, Minke Whale)

Protein Percentage 48.81%
cDNA percentage 60.68%
Ka/Ks Ratio 0.57211 (Ka = 0.5508, Ks = 0.9628)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:290138..308198   Strand:+
>bmy_04893
ATGGTATTCTTCCTCCCTAGGGTATCCACAGCAAATCAGAACACAGACGACAGGCTGATCTTTGAGACTGTATTCAGGCACTTCAAAAGACATAAAGTGGAGATTTCAACTGCAATAAAAAAGACATTTCCTTTCTTTGAGGGTCTTCGTGACCGTGAACTCATCACCAATAGAGTGTATGAAGTAATAATCCAGGAGAAAATTAATCATGAAGAAAGCAATGGAGAAGAGTGGGAGGAGAGGCCTACTCTCCCACTAAGCCTTGAGCAAGGTACAACCTCACCTGAAAATGGACTCTCGGATAACCTCTGTGAAACAGAACAGATAAATGCAAAGAGGAAAGATACAACCAGCAACCAAAACGATGCACTAGAAAGCCAAGAAGCAAATGAACAATGTGCCCAAGAGTCTGAACCAGCAGAGTCCTGCGAACAAGTACCTATCCAGTCAAATAATGGTGATGCAAGAAAGGAGACACCCAGCCCATTGCCTTATGAGGAAGAAGAAGCAAAGCTACCCAACCATGGATTTCAAATCAATTCCTGTTCTGTCCTTCTGGTGGATATAAAGAAGGAAAAGCCATTTTTTAACCCCGAAGTTGAATGGCAAACCCAAGCCAGGAYTGACTGTAACCAGGCATCTGATGTAATAGTGATCAGCAGTGAGGACTCCGCAGAATCCAGTGATGGAGAAGAGTCCCCAGAACCCTCCACATCAGCACTGAGAACATCGTCTGATCCTTGGGATATTGAAAACACATCAATTTGCAGCATAAGCAATAGGAAAAGACGACGAATCAGCAGTGATGACACTTCAGAACTGAGTAACGAAGATGAGCCTCAGGAAACGTCTAACTCAGTCCTAAGAAATGGGTCAGGTAAAGAAGATTAG

Related Sequences

bmy_04893T0 Protein

Length: 297 aa     
>bmy_04893T0
MVFFLPRVSTANQNTDDRLIFETVFRHFKRHKVEISTAIKKTFPFFEGLRDRELITNRVYEVIIQEKINHEESNGEEWEERPTLPLSLEQGTTSPENGLSDNLCETEQINAKRKDTTSNQNDALESQEANEQCAQESEPAESCEQVPIQSNNGDARKETPSPLPYEEEEAKLPNHGFQINSCSVLLVDIKKEKPFFNPEVEWQTQARXDCNQASDVIVISSEDSAESSDGEESPEPSTSALRTSSDPWDIENTSICSISNRKRRRISSDDTSELSNEDEPQETSNSVLRNGSGKED*