Part of scaffold_159 (Scaffold)

For more information consult the page for scaffold_159 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPR55 ENSTTRG00000014269 (Bottlenosed dolphin)

Gene Details

G protein-coupled receptor 55

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013524, Bottlenosed dolphin)

Protein Percentage 94.03%
cDNA percentage 95.81%
Ka/Ks Ratio 0.28773 (Ka = 0.0301, Ks = 0.1045)

BT.87199 ENSBTAG00000017431 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023175, Cow)

Protein Percentage 86.83%
cDNA percentage 89.76%
Ka/Ks Ratio 0.19469 (Ka = 0.0663, Ks = 0.3407)

GPR55  (Minke Whale)

Gene Details

G protein-coupled receptor 55

External Links

Gene match (Identifier: BACU010967, Minke Whale)

Protein Percentage 96.19%
cDNA percentage 97.75%
Ka/Ks Ratio 0.27838 (Ka = 0.015, Ks = 0.0538)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location:565858..564833   Strand:-
>bmy_04898
ATGAGCCAGCTAAGCCAGAGTGAGTACTGCTCCTTCCACGATGTGGATGAGCTGATGAAAACCGTGCAGCTGGCTGTCCACATCCCCACCTTCCTCCTCGGTCTGCTCCTCAATTTGCTCGCCATCCGAGGCTTCAGCTCCTTCCTGAAGAAGAGGTGGCCCTGCTACGCTGCCACCTCCATCTACATGATCAACCTGGCGGTCTTTGACCTGCTGCTGGTGCTCTCTCTCCCATTCAAGATGGCCCTGTCTCACGTGAAGGCTCCCCTTCTTCCCTTCTGTACCCTAGTGGAGTGCCTCTACTTCATCAGCATGTATGGGAGCATCTTCACTATCTGCTTCATCAGCCTGGACAGATTCTTGGCCATCCGGTACCCGCTGCTGGTCAGCCACCTCCGGTCCCCCAGGAAGACCTTTGGGATCTGCTKCGTCATCTGGGTCCTGGTGTGGGTGGGGAGCACCCCTATCTATAGCTTCCATGGGAAAGTGGAAGATTACACGTGCTTCCACAACATGTCTGACGGCACCTGGAGTGCCAAGGTCTTCTTCCCTCTTGAGGTCTTCGGCTTCCTTCTTCCCATGAGCATCATGGGTTTCTGCTCCTCCAGGAGCATCTGCATTCTGGTCGCCCGTCGGGACCACACCCAGGACTGGGTCCAGCAGAAGGCCTGTATCTGGACTATCGCGGCCAGTCTGGCTGTCTTTGTGGTCTCCTTTCTCCCAGTCCACCTGAGTTTCCTCTTGCAGTTCCTGGTGAGGAATGGCTTTATCGTGGAGTGCAGAGCCAAGCAGAACATCATCTTGTTCCTGCAACTGTCCATGTGTTTCTCCAATATCAACTGCTGTCTGGATGTTTTCTGCTACTACTTTGTCATCAAAGAATTCCGCATGGATATGATGGCCCACCAGCCTCCCAGGGCCCAGCTGGTCCTCCAGGACACCATGACCACCATGGTTAAGGGAAGAAAGCTGTGCTTGGAGGAAGGAAACCTCGGTCTGAATTCCACAGCAGATACCTCTTCCTAG

Related Sequences

bmy_04898T0 Protein

Length: 342 aa      View alignments
>bmy_04898T0
MSQLSQSEYCSFHDVDELMKTVQLAVHIPTFLLGLLLNLLAIRGFSSFLKKRWPCYAATSIYMINLAVFDLLLVLSLPFKMALSHVKAPLLPFCTLVECLYFISMYGSIFTICFISLDRFLAIRYPLLVSHLRSPRKTFGICXVIWVLVWVGSTPIYSFHGKVEDYTCFHNMSDGTWSAKVFFPLEVFGFLLPMSIMGFCSSRSICILVARRDHTQDWVQQKACIWTIAASLAVFVVSFLPVHLSFLLQFLVRNGFIVECRAKQNIILFLQLSMCFSNINCCLDVFCYYFVIKEFRMDMMAHQPPRAQLVLQDTMTTMVKGRKLCLEEGNLGLNSTADTSS*