Part of scaffold_159 (Scaffold)

For more information consult the page for scaffold_159 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA3 ENSBTAG00000030718 (Cow)

Gene Details

spermatogenesis-associated protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041004, Cow)

Protein Percentage 75.39%
cDNA percentage 81.5%
Ka/Ks Ratio 0.40237 (Ka = 0.1705, Ks = 0.4239)

SPATA3  (Minke Whale)

Gene Details

spermatogenesis associated 3

External Links

Gene match (Identifier: BACU010969, Minke Whale)

Protein Percentage 76.62%
cDNA percentage 81.17%
Ka/Ks Ratio 0.65948 (Ka = 0.2023, Ks = 0.3067)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 576 bp    Location:639029..643271   Strand:+
>bmy_04899
ATGAAGAAGGGCAAGAGGCAGAAGTCAGAGGCCAGGCGCCGAGGCTCCACCTCCCAGCGCGCCAGCTCCGAATCCAGCCCTCAACAGCAGAGCTCGGAGTCCAGTTCACAGCAGCCCATCTCCAGATCCAGCCCACAGCCGCCCAGCCCCCGGCCCACCTTGCAGCTGTCCAGCCCGGGACCCACCCCGCAGCCAACCAGCTCTGGAGTCACCTCACAGCCCAGCAGTGAATCCACCGCCCCGCAGCCTGTGCCCCAGGCTCTCCCGGCTCCCGAACTCAGCCGCTCGGCTCGGGGCGTCGTGTCTCCGGACACTGACACAAAAGCATCCCCTCGATCCAGGAAAACAGCAGGGCCTGTGACGCGAGCGGGCCCGCGCGCCTTCTGTTCCTGTTCCGCTTGCCCCGGCAGCTCTGCTTGCTGGTGCCGTCTGGGCCTGTGCCATAGCCGCATCTTCGATGTCCTTCTGCCCCGGGCCTGGCCGACCATGCCAGGGAGAGGATTCCCAAACTTCCTCACCTTCTACAGGTCCTGGAGCACGTGGGGGGCTGGGCCCTCGGGGCACGCACTGTATTAG

Related Sequences

bmy_04899T0 Protein

Length: 192 aa      View alignments
>bmy_04899T0
MKKGKRQKSEARRRGSTSQRASSESSPQQQSSESSSQQPISRSSPQPPSPRPTLQLSSPGPTPQPTSSGVTSQPSSESTAPQPVPQALPAPELSRSARGVVSPDTDTKASPRSRKTAGPVTRAGPRAFCSCSACPGSSACWCRLGLCHSRIFDVLLPRAWPTMPGRGFPNFLTFYRSWSTWGAGPSGHALY*