Sequence detailsbmy_04912 (Coding sequence)

Part of scaffold_159 (SequenceType object (1))

For more information consult the page for scaffold_159 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDE6DENSTTRG00000009165 (Bottlenosed dolphin)

Gene Details

phosphodiesterase 6D, cGMP-specific, rod, delta

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008680, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.75%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0075)

PDE6DENSBTAG00000019480 (Cow)

Gene Details

Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025947, Cow)

Protein Percentage 100.0%
cDNA percentage 96.95%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1235)

Additional orthologs identified in other species via the OPTIC pipeline.

PDE6D (Human)   Pde6d (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 396 bp    Location:1222099..1216403   Strand:-
Raw sequence 
>bmy_04912
ATGAACCTTCGGGATGCTGAGACAGGGAAGATACTCTGGCAAGGAACAGAAGACCTGTCAGTCCCTGGAGTGGAGCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAATTGAACTTCTCTTCAGCAGAGCAAATGGAAAAATTCCGCCTGGAACAAAAAGTTTACTTCAAAGGGCAATGCCTAGAAGAATGGTTCTTCGAGTTTGGCTTTGTGATCCCTAACTCCACAAACACCTGGCAGTCCCTGATAGAGGCAGCGCCCGAGTCCCAGATGATGCCAGCCAGCGTGCTAACTGGAAATGTTATCATAGAGACAAAGTTTTTTGACGACGATCTTCTCGTAAGCACATCCAGAGTGAGACTTTTCTACGTTTGA

Related Sequences

bmy_04912T0 SequenceType object (3)

Length: 132 aa      View alignments
>bmy_04912T0
MNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV*