Part of scaffold_159 (Scaffold)

For more information consult the page for scaffold_159 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPS7B ENSTTRG00000009170 (Bottlenosed dolphin)

Gene Details

COP9 signalosome subunit 7B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008687, Bottlenosed dolphin)

Protein Percentage 82.21%
cDNA percentage 84.98%
Ka/Ks Ratio 0.61722 (Ka = 0.1514, Ks = 0.2453)

COPS7B ENSBTAG00000005207 (Cow)

Gene Details

COP9 signalosome complex subunit 7b

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006858, Cow)

Protein Percentage 99.6%
cDNA percentage 96.31%
Ka/Ks Ratio 0.01285 (Ka = 0.0019, Ks = 0.1459)

COPS7B  (Minke Whale)

Gene Details

COP9 signalosome subunit 7B

External Links

Gene match (Identifier: BACU010977, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.79%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0066)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 837 bp    Location:1274192..1294005   Strand:+
>bmy_04913
ATGTCACATATCAGTAGGAGGCCAAATAAAGGGGTTTTCCTCATGGAATTACACAGCATATCTCAAGACCAGAGAATGGCAGGTGAACAGAAACCCTCAAGTAACCTCCTGGAACAGTTTATCTTACTAGCCAAAGGTACCAGTGGCTCAGCCCTCACTGCTCTCATAAGCCAAGTTTTGGAGGCTCCTGGAGTATATGTCTTCGGAGAACTGCTGGAGCTGGCCAATGTGCAGGAGTTGCTGAACCTGTTTGCCTATGGAACATACCCAGATTACATAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAACACCTTACCATCGTGAGCTTGGCGTCAAGGATGAAGTGTATCCCCTACTCCGTGCTGCTGAAGGACCTGGAGATGCGGAATCTCCGGGAACTGGAAGACCTCATCATCGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGGATCAGCGAAACCAGCTGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCCGAAAGAGAGATATCAATAATATTGTCAAGACCTTGCATGAATGGTGTGATGGCTGCGAGGCAGTCCTGCTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAGGAGAACCACAGCCGAACTCAGCAGCAGGTAGAGGCCGAGGTTACCAACATCAAGAAGACACTCAAAGCTACCGCGTCCTCCTCAGCTCAGGAGATGGAGCAACAGTTGGCTGAACGAGAGTGTCCCCCCCATGCTGAGCAGAGGCAGCCCACTAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAG

Related Sequences

bmy_04913T0 Protein

Length: 279 aa      View alignments
>bmy_04913T0
MSHISRRPNKGVFLMELHSISQDQRMAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKRDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAERECPPHAEQRQPTKKMSKVKGLVSSRH*