Part of scaffold_172 (Scaffold)

For more information consult the page for scaffold_172 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RTN4IP1 ENSTTRG00000008797 (Bottlenosed dolphin)

Gene Details

reticulon 4 interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008328, Bottlenosed dolphin)

Protein Percentage 97.58%
cDNA percentage 98.07%
Ka/Ks Ratio 0.32825 (Ka = 0.0133, Ks = 0.0404)

RTN4IP1 ENSBTAG00000017554 (Cow)

Gene Details

Reticulon-4-interacting protein 1, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023334, Cow)

Protein Percentage 96.62%
cDNA percentage 94.36%
Ka/Ks Ratio 0.07623 (Ka = 0.0158, Ks = 0.2068)

RTN4IP1  (Minke Whale)

Gene Details

reticulon 4 interacting protein 1

External Links

Gene match (Identifier: BACU014181, Minke Whale)

Protein Percentage 99.52%
cDNA percentage 99.03%
Ka/Ks Ratio 0.0635 (Ka = 0.0022, Ks = 0.0342)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 624 bp    Location:1280971..1274037   Strand:-
>bmy_04949
ATGGGATTTCTGAAGACCTGTGTACTTAGAAGAAATGCATGCACTGCGGTTTGCTTCTGGAGAAGACAAGTTGTACAAAAGCCTTCGGTTAGAAAGATTAGTACTACCTCTCCAAGGAGCACTGTCATGCCCGCTTGGGTGATAGATAAATATGGGAGTAATGAAGTGCTTCGATTTACTCAGAACATGATGATACCAATGATACACTATCCAAATGAAGTCATTATCAAAGTTCACGCTGCGAGTATAAATCCTATAGATGTTAATATGAGAAGTGGCTATGGAGCTACAGCTTTAAATATGAAACGTGATCCTTTACATATTACAATCAAAGGAGAAGAATTTCCCCTGACTCTGGGCCGGGATGTGTCTGGTGTGGTGATGGAGTGTGGACTTGATGTGAGGTACTTCAAGCCTGGCGATGAGGTCTGGGCTGCAGTTCCTCCCTGGAAACAAGGCACTCTCTCAGAGTTTGTTGTAGTCAGTGGGAATGAGGTCTCTCACAAGCCCAAATCACTCACTCATACTCAAGCTGCCTCTCTGCCATATGTGGCCCTCACAGCCTGGTCTGCCATAAACAAGATTGGTGGCCTGAATGATAAGAATTGCACAGGAAAACGGTGA

Related Sequences

bmy_04949T0 Protein

Length: 208 aa      View alignments
>bmy_04949T0
MGFLKTCVLRRNACTAVCFWRRQVVQKPSVRKISTTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHITIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKIGGLNDKNCTGKR*