Sequence details bmy_04954 (Coding sequence)

Part of scaffold_171 (Scaffold)

For more information consult the page for scaffold_171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCGB1C1 ENSTTRG00000013494 (Bottlenosed dolphin)

Gene Details

secretoglobin, family 1C, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012800, Bottlenosed dolphin)

Protein Percentage 71.26%
cDNA percentage 81.99%
Ka/Ks Ratio 0.51457 (Ka = 0.1871, Ks = 0.3636)

SCGB1C1 ENSBTAG00000022142 (Cow)

Gene Details

secretoglobin family 1C member 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029856, Cow)

Protein Percentage 65.52%
cDNA percentage 76.25%
Ka/Ks Ratio 0.40467 (Ka = 0.2493, Ks = 0.616)

Additional orthologs identified in other species via the OPTIC pipeline.

SCGB1C1 (Human)   Scgb1c1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 264 bp    Location:640..3340   Strand:+
Raw sequence 
>bmy_04954
ATGACAGGAATAAAGTCCACATTTAGTCGAGGGCTGGCCACGGGGGAGGACCACAACGAGTCTTTCATCGACTTCCTGCAAACGCTGCTGGTGGGATCCGCAGAGGAGCTCTATGAGGGGCCCCTGGGCAAGTACGACGTCAGGGCAGATGCCAAGGCAGCGGTGACCGAGCTCAAGTCCTGCATAGATGGCCTGCAGCCCATGCACGAGGCGGAGCTGGTCAAGCTGCTGGTACCGTGGCCAGGGGGGCACCCCATTCCCTAA

Related Sequences

bmy_04954T0 Protein

Length: 88 aa      View alignments
>bmy_04954T0
MTGIKSTFSRGLATGEDHNESFIDFLQTLLVGSAEELYEGPLGKYDVRADAKAAVTELKSCIDGLQPMHEAELVKLLVPWPGGHPIP*