Part of scaffold_171 (Scaffold)

For more information consult the page for scaffold_171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIGIRR ENSTTRG00000006039 (Bottlenosed dolphin)

Gene Details

single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005714, Bottlenosed dolphin)

Protein Percentage 81.6%
cDNA percentage 83.38%
Ka/Ks Ratio 0.34533 (Ka = 0.0575, Ks = 0.1666)

SIGIRR ENSBTAG00000011149 (Cow)

Gene Details

single Ig IL-1-related receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014806, Cow)

Protein Percentage 85.87%
cDNA percentage 88.89%
Ka/Ks Ratio 0.26028 (Ka = 0.0788, Ks = 0.3029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1530 bp    Location:214795..209226   Strand:-
>bmy_04970
ATGTGGCAGCCCTGTCCCAGGCGACCTGGGAACGAGGCCAACTCCCGGGCTCACGAGGGGTGCCAGGAGTGCTGTCCCACCCTGGGCTGTCACGGTGTCCCTGGGGCAGATGACGTGCAGTCTAGGCTGTGCCTGGTGCTCTGCGGCCTCCAGGCGGCAGCTGGGGCAGAGACAGTGCTTCGGTGGCCAGAGTTACACGTTAACTTATCCTGTTCTTGTTTAACTTGCTCCCGGGGATGGTGGCAGCCTCTGACCCGTCCCGGTGCCCTGACTGACTGGCCACAAGGACAGAGATTGAATCCTGCCCAGCCCTTGAGGGATCAGTCTGCTCGGCCAAGGAGCCCCGGGGAGCCGTGGGTGGCACCAGTGTCCAGCCTGCCTCGAGGAGGCCCCGGCCAGACCATGGCAGGACCCTGCGACAGGGCCCCTGACTTCCTCTCCCCATCTGGAAACCAGGTCCTGTGGCCTGCCCTGGGCAGTGTGGTCACTCTGAACTGCACGGCCTCGGTGGTGTCTGGGCCCCACTGCCCCTTGCCCTCGGTCCAGTGGCTGAAAGATGGGCTGCTGCTGGGCAATGGAAGCCACTATGACCTCCATGAGGACTCCTGGGTCAAGGCCAACTGGTCAGAGGTGCTTGTGTCCAGTGTCCTGCGGATCAACCTGACCAGTACTGAGGACTTCAGGACCTTCACCTGCTCCGTCCAGAACACCAGCTCCTCTTCCTTCACTCTTGGGAGAGCTGGCCTGGCTGGACATGTGGCCGCGGTGTTGGCCTCACTCCTGGTCCTGCTGGTCCTGCTCCTGGCAGCGCTGCTATACGTGAAGTGTCGACTCAGTGTACTGCTCTGGTACCAAGACACGTATGGGGAGGTGGAGATGAACGACGGGAAGCTCTACGACGCCTACGTCTCCTACAGCGACAGCCCCGAGGACCGGAAGTTCGTGAACTTCATCCTGAAGCCGCAGCTGGAGCGGCGTCGGGGTTACAAGCTCTTTCTGGACGACCGCGACCTCCTGCCGCGCGCGGAGCCGTCGGCCGACCTCCTGGTGAACCTGAGCCGCTGCCGGCGCCTCGTCGTGGTGTTGTCCGACGCCTTCCTCGGCCGGGCCTGGTGCAGTCACAGCTTCCGGGAGGGCCTGTGCCGGCTGCTGGAGCTCACGCGCAGACCCATCTTCATCACTTTCGAGGGCCAGCGGCGCGACCCCGCACACCCTGCGCTCCGCCTGCTGCGCCAGCATCGCCACCTGGTGACCCTGCTGCTCTGGAGGCCCGGTTCCGTGATGCAGGAGGGACAGCAGGGAGTGACCCTGGCAGAAGGCAGGCTGTGGGCAGCCCAGCCTCAGGCCTGGCGGTACCCCTCCCCAGGTGTACGAGGGCCTGTCTTTGGGGAGCCAGCAGCTCCACCGCATGCAAGTGGGGTCTCGCTTGGAGAGGGGCAAGGCAGCGAAGTGGATGTGTCGGACCTTGGCTCCCGAAACTACAGTGCCCGCACGGACTTCTATTGCCTGGTGGCGGAGGATGACGTGTAG

Related Sequences

bmy_04970T0 Protein

Length: 510 aa      View alignments
>bmy_04970T0
MWQPCPRRPGNEANSRAHEGCQECCPTLGCHGVPGADDVQSRLCLVLCGLQAAAGAETVLRWPELHVNLSCSCLTCSRGWWQPLTRPGALTDWPQGQRLNPAQPLRDQSARPRSPGEPWVAPVSSLPRGGPGQTMAGPCDRAPDFLSPSGNQVLWPALGSVVTLNCTASVVSGPHCPLPSVQWLKDGLLLGNGSHYDLHEDSWVKANWSEVLVSSVLRINLTSTEDFRTFTCSVQNTSSSSFTLGRAGLAGHVAAVLASLLVLLVLLLAALLYVKCRLSVLLWYQDTYGEVEMNDGKLYDAYVSYSDSPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLVVVLSDAFLGRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVMQEGQQGVTLAEGRLWAAQPQAWRYPSPGVRGPVFGEPAAPPHASGVSLGEGQGSEVDVSDLGSRNYSARTDFYCLVAEDDV*