Part of scaffold_171 (Scaffold)

For more information consult the page for scaffold_171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRF7 ENSTTRG00000011148 (Bottlenosed dolphin)

Gene Details

interferon regulatory factor 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010571, Bottlenosed dolphin)

Protein Percentage 83.27%
cDNA percentage 87.21%
Ka/Ks Ratio 0.50267 (Ka = 0.0814, Ks = 0.162)

BT.96672 ENSBTAG00000047680 (Cow)

Gene Details

interferon regulatory factor 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056564, Cow)

Protein Percentage 82.71%
cDNA percentage 85.69%
Ka/Ks Ratio 0.22795 (Ka = 0.099, Ks = 0.4344)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1608 bp    Location:369786..367183   Strand:-
>bmy_04979
ATGGCCGTGGCTCCCGACGGGGGGACCCCGCGCGTGCTCTTCGGAGACTGGCTTCTGGGCGAGGTCAGCAGCGGCCGCTACGAGGGACTACGGTGGCTGGACGCGGCCCGAACGCGCTTCCGCGTGCCCTGGAAGCACTTCGCGCGGAAGGACCTGGGAGAGGCCGACTCGCGCATCTTCAAGGCCTGGGCCGTGGCCCGCGGCAGGTGGCCTCTCCGCAGCAGCGGAGGTGCCCGGCCGACCGCCGAGAGTGCGCTCCGAGCTTCCTGGAAAACCAACTTCCGCTGCGCGCTGCGCTGTACGCGGCGCTTCGTGATGTTGCAAGACAACTCGGGGGACCCTACCGACCCTCATAAGGTGTACATGGTCACCCCCAAGCCGGCGTGCGGAGAAAGCCCAGGCATTAGCCAGGGGGAGGACGAGGCCCTTGAAGATACCCCACCTACAAGGGATGGGCTTCTGGGGCCACACCTGGCAGCAGATGCTGGCGAGAGGCTGGGGCATGGGCTGGCCGGACTGAGCCCCGAGCCCTGTGCCCCGAGCCCAGCTGGAGATTCTGGGGACCTATTGCTGCAGGCTCTGCAGCAGAGCTGCCTGGAGGACCATCTGCTGAAAGCTGCGTGTGGGGTGGCGCCGACAGCCCCCGAGGCTGCTGGTAAGGGGCTGTTGGAGGGGGATGCTCTGCTCTGCAGGGCTCTGTGTGCCAAGGGGAGGGACAGGCAGGACAGCAGAGTCCCTGGAGAGAGAGGGCCCGGGGGAGGGGGGTGCCCAGCAGGGATGGTGCTGGCCAGAGACACAGGCCCACCTCCAGCCGCCTGGCAGCCCCGAGAGGCGGAGCCCTGCACCGCAGCCTCCCCCAGTGCCTGCACCCTGATGGCAGGGCCTCTGCACGTGGCTGGTCCCACCTGCTCACACCTCCGTCTGCACACACTGCCCAGCTTGGGGGCCCTGGACTTGACCATCACGTACAAGGGCCGAACAGTGCTGCAGGAGGTGGTGGGGCGCCCGAGCTGTGTGCTCCTGTACGGCCCCCCCGGTGTAGGTGGTGGGGCTTCAGAGCCCCAGCGAGTAGCCTTTCCTAGCCCCGCCGAGCTGCCCGACCAGAAGCAGCTCCACTACACAGAGAAGCTGCTGCAGCACGTGGCCCCCGGCCTGCAGCTGGAACTCCGGGGTCTCAGGCTGTGGGCCCGGCGCCTGGGCAAGTGCAAGGTCTATTGGGAGGTGGGAGGGCCCCTGGGCTCGGCCAGCCCCTCCACCCCCGCCCGCCTGCTGCCCCGGAACTGCGACACCCCCATCTTTGACTTGGGCACCTTCTTCCAAGAACTGGGGGAGTTTCAGGCCTGCCGGCGCCGGGGCTCCCCTCACTACACCATCTACCTGGGCTTTGGGCAGGACCTGTCAGTGGGGAGGCCCAAGGAGAAGAGCCTGGTCCTGGTGAAGCTGGAGCCATGGCTGTGCCGGGCATACCTGGAGGGCGTGCAGCGCGAAGGCGCGTCCTCTCTGGACAGCGGCAGCCTCAGCCTCTGCCTGTCCAGCTCCAACAGCCTCTATGATGACCTGGAGCACTTCCTGGAGCACTTCCTGATGGAGGTGGAGCAGCCCGGCTAG

Related Sequences

bmy_04979T0 Protein

Length: 536 aa      View alignments
>bmy_04979T0
MAVAPDGGTPRVLFGDWLLGEVSSGRYEGLRWLDAARTRFRVPWKHFARKDLGEADSRIFKAWAVARGRWPLRSSGGARPTAESALRASWKTNFRCALRCTRRFVMLQDNSGDPTDPHKVYMVTPKPACGESPGISQGEDEALEDTPPTRDGLLGPHLAADAGERLGHGLAGLSPEPCAPSPAGDSGDLLLQALQQSCLEDHLLKAACGVAPTAPEAAGKGLLEGDALLCRALCAKGRDRQDSRVPGERGPGGGGCPAGMVLARDTGPPPAAWQPREAEPCTAASPSACTLMAGPLHVAGPTCSHLRLHTLPSLGALDLTITYKGRTVLQEVVGRPSCVLLYGPPGVGGGASEPQRVAFPSPAELPDQKQLHYTEKLLQHVAPGLQLELRGLRLWARRLGKCKVYWEVGGPLGSASPSTPARLLPRNCDTPIFDLGTFFQELGEFQACRRRGSPHYTIYLGFGQDLSVGRPKEKSLVLVKLEPWLCRAYLEGVQREGASSLDSGSLSLCLSSSNSLYDDLEHFLEHFLMEVEQPG*