Part of scaffold_171 (Scaffold)

For more information consult the page for scaffold_171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDHR5 ENSTTRG00000011150 (Bottlenosed dolphin)

Gene Details

cadherin-related family member 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010573, Bottlenosed dolphin)

Protein Percentage 79.34%
cDNA percentage 84.76%
Ka/Ks Ratio 0.47583 (Ka = 0.1364, Ks = 0.2866)

BT.97581 ENSBTAG00000047914 (Cow)

Gene Details

cadherin-related family member 5 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056230, Cow)

Protein Percentage 64.37%
cDNA percentage 73.11%
Ka/Ks Ratio 0.3035 (Ka = 0.2586, Ks = 0.852)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2595 bp    Location:377825..371580   Strand:-
>bmy_04980
GGCGAAGGTCGCCCAGGCAGAGACTGCGCCAGCAACACAGCCGCTCAGAGGGTCCCAGACGCCAGCCGGGCTCGGACCCTCCCCCGGGGCCGCCCGCCTGCTGAGATGGGGGCTCGGGCCCTGCTGCTCCCTCTGCTTGTGGCCGCGGCCCAGGCCCAGGTCTGCTCTGTGAACAAGACCTTCTTCCAAGTCAAGGAGAACACGAGTCCCGGGCAGCTCCTCCTCGACATCTACGTCCCTGAGGGCCAGCAGGTGACCCTCGGACCCTCGTCCACCCGTTTCGCATTTCGGATCCAGGGGACTCAGCTGTTTCTCAATGTGACCCCGGACTACGAGGACGCTAAAGTGAATGCCGTCGTCATCCCCGAGACAGAGCTGAAGGCCCAGGACCTCGACAGAAATGACATCCTGTTCTACACCCTCCAGGAAGTGACCCCGGGTGCCAGCGGCTTCTTCTCTTTGGTGGGTGCGAACCGCCCAGAGCTGCGGCTGGACCGGTCACTGGACTTCGACAGGTTGCCGAACATGACCTTCCAGCTGCTGGTCCGGGACACGCGAGAGGAGAACGTGGAGCCCAGCCACACGGCCACGGCCACCTTGGTCCTGGAGGTGCAGCCCGCCAACCTGCGGCCCCCCTGGTTCCTGCCCTGCACATACTCTGACGGTTTTGTCTGCATCCACGCCCAGTACCACGGGGCTGTGCCCACAGGCCACACACTGTCAGGACCCCTCATCCTGCATCCTGGGCCCATCTACGCCGTGGACGGGGACCGGGGCATCAATCAACCCATCGTGTACAGCATCATCAGGGGAAACGAGGACGGCTCGTTCTCCATTGATGCCAACACAGGCAACCTCACCGTGACCAAGAGCATCCCCAGCCCCAAGACCTTCTTTCTGCTGGTCAAGGGCGAGCAGGCAGATCGCGCCAGCTACTCGGTGACCCAGGTCACGGTGGAGGCCCGGGCCGCCAGTGGGAGCCCGCCCCGCTTCCCCCAGAGCCTGTACCGCGGCACTGTGGCGCTCGGCTCCGGGGTGGGCGTGGCCGTCAGGGATGCAGCTGCCCCCTCCCAGCCTCTGAGGATCCGGGCCCAGGATCCTGAGTTCCCAGTAGGCACCGCCTGGTCCCTGGGTCTGCCCGGCCTCCTGCTGACTCACTGGGGCCACGTCCAGGACCTCAACTCGGCCATCACGTATCGGATCACCAACGACTCTAACTTCACAATGGACGGGGAGGCCGTGCTGACTGGCGCTTCACCGGTGCAAGCCGGGGTCTTCTATGCAGAGGTTGAGGCCAAGAACACGGTGACCTCAGGCACAGCGACCACGGTCGTGGAGGTTCGAGTCTCAGAACAGGAACCCACCCCCGCAGGTGAGCCTCCCAGGGACCCCGGGTCGGCTCGGGGAGGGCTTCTTGCTAGGGGGAGTGGCGAGCCTGAGCCCTGGCCCTGGCCCCAGGCCCCCCCACGTCCCCAGAGACAGCAGGAACAACCAGAGCCTCGAGCGGCACCACGTCGGAAGCCCCCCGGCCCCCTGAGCCCTCTCAGGGGTCCTCCGCGACCAGCCCTGGGGGAGACAGCGGCCCACACCCCTCCTCAGCCTCACCCAGCGGAGGCTCAGCACAGACCTCGAAGCCAGGAACCTCTCTGCCAACGTCCCCTGGGCCCAGCAGCACCCTCCCACCCACAGGTAGCACAACCATTTACCCTACTTACCCTCATGCTCTCTGACTCAGGACTCTGGGCGGTCGCTGTGGGGGCCATTCAGCCCACGGGCCCCGTGCTACCCTCAGCTCCCTGCCTGGCATGTTGGCCCCCTGCCTCCCACCTGGAACTGGCGGGCACTGACCCCCTCCCCGCTCCCAGCAGCCCGGCCTATTGGGGCTCCCTGGCGGGGGTCAGTGGTGCCCACTCCTGCAAACCTCACCTCCGTGAGTGGGCAGTGGCGTTGCCAGCAGGGACGTCCGGGACCGGAGGAGGCAGCACGACAGTGGACGGCAGTCCACCTGTAAGCCGCGCTGAGGACCGGCACTTCTCGGTGGTGGACATGGCGGCGCTGGGCGGGACGCTGGGCGCGCTGCTGCTTCTGGCGCTGATCGCCCTCACGGTGCTCGTCCACAAGCACTATGGCCACCGACTCAAGTGCTGCTGCGGCAAAGCGCTGGAGCCCCAAGGCTTTGACAACCAGGTCTTCCTCAACAACCCCGACGAGGCCAACTGGGCGCCGGCTCCTAGCCCCTCATCCAGTCCCGCCCCGCCGGCTCCCCCAGAGCCTGCACCCCCAGAACCCAAGCCCCCCAGCCCGGAGACCCTCCGCCGAGTCCCCGAGTCCCCTGCGGTGGCCCTGGATGAGGACGGCCCGGCAGCTGTGAGGTCCATCCTGACCAAGGAGCGGCGGCCTGAGGGTGGCTACAAGGCGGTGTGGTTCGGCGAGGACATCGGGGCCGAGGCCGACGTGGTGGTCCTCAACACGCCTGCCTCGGAAGTGGACGGTGCTGGCGACGAGGGCAGCGAGGGCAGCGGCGACGAGGGCGCAGAGGCGGGCCTGCGCGGGGGTGCCCAGCACGCGCCTGGCTCCGACTCCATCTACCTCTAG

Related Sequences

bmy_04980T0 Protein

Length: 865 aa      View alignments
>bmy_04980T0
GEGRPGRDCASNTAAQRVPDASRARTLPRGRPPAEMGARALLLPLLVAAAQAQVCSVNKTFFQVKENTSPGQLLLDIYVPEGQQVTLGPSSTRFAFRIQGTQLFLNVTPDYEDAKVNAVVIPETELKAQDLDRNDILFYTLQEVTPGASGFFSLVGANRPELRLDRSLDFDRLPNMTFQLLVRDTREENVEPSHTATATLVLEVQPANLRPPWFLPCTYSDGFVCIHAQYHGAVPTGHTLSGPLILHPGPIYAVDGDRGINQPIVYSIIRGNEDGSFSIDANTGNLTVTKSIPSPKTFFLLVKGEQADRASYSVTQVTVEARAASGSPPRFPQSLYRGTVALGSGVGVAVRDAAAPSQPLRIRAQDPEFPVGTAWSLGLPGLLLTHWGHVQDLNSAITYRITNDSNFTMDGEAVLTGASPVQAGVFYAEVEAKNTVTSGTATTVVEVRVSEQEPTPAGEPPRDPGSARGGLLARGSGEPEPWPWPQAPPRPQRQQEQPEPRAAPRRKPPGPLSPLRGPPRPALGETAAHTPPQPHPAEAQHRPRSQEPLCQRPLGPAAPSHPQVAQPFTLLTLMLSDSGLWAVAVGAIQPTGPVLPSAPCLACWPPASHLELAGTDPLPAPSSPAYWGSLAGVSGAHSCKPHLREWAVALPAGTSGTGGGSTTVDGSPPVSRAEDRHFSVVDMAALGGTLGALLLLALIALTVLVHKHYGHRLKCCCGKALEPQGFDNQVFLNNPDEANWAPAPSPSSSPAPPAPPEPAPPEPKPPSPETLRRVPESPAVALDEDGPAAVRSILTKERRPEGGYKAVWFGEDIGAEADVVVLNTPASEVDGAGDEGSEGSGDEGAEAGLRGGAQHAPGSDSIYL*