Sequence detailsbmy_04987 (Coding sequence)

Part of scaffold_171 (SequenceType object (1))

For more information consult the page for scaffold_171 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDDC1ENSTTRG00000012445 (Bottlenosed dolphin)

Gene Details

Parkinson disease 7 domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011801, Bottlenosed dolphin)

Protein Percentage 97.79%
cDNA percentage 97.97%
Ka/Ks Ratio 0.08492 (Ka = 0.0088, Ks = 0.1037)

PDDC1 (Minke Whale)

Gene Details

Parkinson disease 7 domain containing 1

External Links

Gene match (Identifier: BACU003628, Minke Whale)

Protein Percentage 95.63%
cDNA percentage 96.28%
Ka/Ks Ratio 0.1414 (Ka = 0.0215, Ks = 0.1521)

Additional orthologs identified in other species via the OPTIC pipeline.

PDDC1 (Cow)   PDDC1 (Human)   Pddc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 663 bp    Location:481052..473821   Strand:-
Raw sequence 
>bmy_04987
ATGGCGTCCGAGCGGCTCCCGAACCGGCCAGCCTGCCTCCTCGTGGCCAGCGGCGCCGCCGAAGGCGTGTCGGCCCAGTCCTTCCTCCACTGCTTCACACTGGCCAGCGCCGCCTTCAATCTGCAGGTGGCCACCCCGGGGGGGAAGACCATGGACTTCGTGGACGTGGACGAGAGCAACGCGCGCTGGGTGCAGGACTTCCGCCTCAAGGCCTACGCCAGCCCTGCCAAGCTCGAGTCCATCGACGGTGCCCGGTACCACGCCCTCCTGATTCCCAGCTGTCCTGGGGCCCTGGCTGACCTGGCCAGCAGTGGGTCCCTGGCTCGCATCCTGCAGCACTTCCGCTCCGAGAGCAAGCCCATCTGTGCTGTGGGCCATGGCGTTGCCGCCCTCTGCTGTGCCACCAATGAGGACAGGTCCTGGGTGTTCCAAGGCTACAGCGTCACGGGGCCTTCTGTGTACGAGCTCGTCCGGGCGCCCGGCTTCGCCCACCTGCCCCTGGTCGTGGAGGACTTCGTGAAGGACGCGGGGGCCTGCTTCAGTGCCAGCGAGCCTGACGCCGTGCACGTGGTGCTGGACCGCCACCTGGTCACTGGCCAGAACGCCGGCTCCACCGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGCGGCAGCCGGAAGTGA

Related Sequences

bmy_04987T0 SequenceType object (3)

Length: 221 aa      
>bmy_04987T0
MASERLPNRPACLLVASGAAEGVSAQSFLHCFTLASAAFNLQVATPGGKTMDFVDVDESNARWVQDFRLKAYASPAKLESIDGARYHALLIPSCPGALADLASSGSLARILQHFRSESKPICAVGHGVAALCCATNEDRSWVFQGYSVTGPSVYELVRAPGFAHLPLVVEDFVKDAGACFSASEPDAVHVVLDRHLVTGQNAGSTVPAVQNLLFLCGSRK*