Part of scaffold_171 (Scaffold)

For more information consult the page for scaffold_171 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSP1 ENSBTAG00000010447 (Cow)

Gene Details

lymphocyte-specific protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013787, Cow)

Protein Percentage 74.86%
cDNA percentage 82.96%
Ka/Ks Ratio 0.31089 (Ka = 0.1503, Ks = 0.4836)

LSP1  (Minke Whale)

Gene Details

lymphocyte-specific protein 1

External Links

Gene match (Identifier: BACU003602, Minke Whale)

Protein Percentage 85.2%
cDNA percentage 89.2%
Ka/Ks Ratio 0.38151 (Ka = 0.0929, Ks = 0.2435)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:1358982..1382806   Strand:+
>bmy_05019
ATGAGCAGCTCTGCGCTCCTGAGAAGGAATTCTAGCAAACAGGGCCTGGAGAGCCTCCTGAGGCTCGCCACTCAGTGGAGCGTGGAAGATGAGGAGGATGGCGCCCGGGGTCGGCGCCAGCAGGAGAGGGGCTGGCAGCTTCCGGCCCAGGATGAGAACGAAGGAGGCCAGTCCCTGGTGCAGCTGGAGCGGGAGAAGCTCCTCAGCCCGAAGCCCTCGGAGGCCCCTGAACTGGACGAGGATGAGGGTTTCGGCGACTGGTCCCAGAAGCCAGAGCAGCGGCGGCAGCACTGGGGGGCTGGGGAGACCACGGACGGTGGGGCGCCCCCTCGGGGCGCGAGTCCGGAGGGGGAGCAGGAGGAGGACAGGCAATGCACCTTTGGGAGCCAGGGTGGCGACGAGCTGACCCCAGCTGGGGTCTGTCTGGACGAGCTGCATCTGAGCCCCGACTCAGAGCCCCAGGAGGGGCCGGGAACAGAGGACACAGAGCCCAAAGGCCCCGAGGGACCCGTCCAGGGCAGCCCAGGGCTGGCAGAGACCAAGGAGGCAGATGAGCAGCACCAGAGATGCCAGCAGCGCAGGACACCCAGCCCCTTGGTCTTGGAGGGGACGGAACCGGGCTCGCCTCCCCTGAGCCCCAGCACCAAACTCAGCGACAGAACTGAGTCCCTGAACCGCTCCATTCAGAAGAGTAACAGTGTGAAGAAGTCCCAGCCAGCCCTGCCCATCTCCACGATTGACGAGCGGCTGGAGCAGTACACCCAGGCCATCGAGACCTCTGGCCGGACCCCAAAGCTAGCCCGCCAGCCATCCATCGAGCTGCCCAGCATGGCCGTGGCAAGCACCAAGAGCCGCTGGGAGACGGGAGAGGTGCAGGCTCAGTCCTCCGCCAAGTCCCCCTCCTGCAAGGATATTGTAGCTGGAGACATGAGCAAGAGGAGCCTCTGGGAGAAGAAGGGAGGCCCCAAGGCTTCGGCGACGCTTAAGAGCACCTTGTCTCCGAAGAGGTACAAGTTTGTGGCCACTGGACACGGGAAGTACGAGAAAGTGCCCGTGGATGAGGGCTCGGCGCCCTAG

Related Sequences

bmy_05019T0 Protein

Length: 359 aa     
>bmy_05019T0
MSSSALLRRNSSKQGLESLLRLATQWSVEDEEDGARGRRQQERGWQLPAQDENEGGQSLVQLEREKLLSPKPSEAPELDEDEGFGDWSQKPEQRRQHWGAGETTDGGAPPRGASPEGEQEEDRQCTFGSQGGDELTPAGVCLDELHLSPDSEPQEGPGTEDTEPKGPEGPVQGSPGLAETKEADEQHQRCQQRRTPSPLVLEGTEPGSPPLSPSTKLSDRTESLNRSIQKSNSVKKSQPALPISTIDERLEQYTQAIETSGRTPKLARQPSIELPSMAVASTKSRWETGEVQAQSSAKSPSCKDIVAGDMSKRSLWEKKGGPKASATLKSTLSPKRYKFVATGHGKYEKVPVDEGSAP*