Sequence detailsbmy_05031 (Coding sequence)

Part of scaffold_171 (SequenceType object (1))

For more information consult the page for scaffold_171 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPM5ENSTTRG00000013213 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily M, member 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012561, Bottlenosed dolphin)

Protein Percentage 54.9%
cDNA percentage 65.94%
Ka/Ks Ratio 0.5108 (Ka = 0.2721, Ks = 0.5327)

TRPM5ENSBTAG00000046662 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000056352, Cow)

Protein Percentage 73.92%
cDNA percentage 79.63%
Ka/Ks Ratio 0.18766 (Ka = 0.1658, Ks = 0.8836)

Additional orthologs identified in other species via the OPTIC pipeline.

TRPM5 (Human)   Trpm5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3600 bp    Location:1794697..1780172   Strand:-
Raw sequence 
>bmy_05031
ATGCAGGGTGCCGGGGGCGCCCGTCCTGGCAGCCACGGGGGTGCTGGCGACCGACAGGGGCCGGGCCTGTGCCGGGGTGAGATCGAATTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTCGTGAAGGTGCCCAGTGGCGTGGCCCCGTCGGTGCTCTTTGACCTTCTGCTGGCCGAATGGCACCTGCCGGCCCCCAACCTGGCGGTGTCGCTGGTGGGCGAGGAGCGGCCCTTCGCCCTGAAGCCGTGGCTGCGGGACGTCCTGCGCAAGGGGCTGGTGAAGGCGGCTCAGAGCACACGTGCCTGGATCCTGACCAGCGCGCTCCGTGTGGGCCTTGCCCGGTACGTCGGACAGGCTGTGCGTGACCACTCACTGGCCAGCACGTCCACCGAGGCCGCGTGGTGGCCATCGGCATCGCCTCATTCGGCCGCGTGCTGCACTTCAGCTTCTGGACGACGCCCAGGAGGACAGCCCTGTCCACTACCCCATGGACGATGGTGGCCACCAGGGCCCCCTCTGCGCCCTGGACAGCGCCCCGGGCGCCCCGGGGAGGGCAGCGAGCCCACTGAGCGGAGGCTGAGGCTGGAGAAGCACATCTCAGAGCAGAGGACCGGCTACGGGCGCACCGGCAGCATCGAGATCCCCGTCCTCTGTCTGCTGGTCAACGGTGACCCCAGCACCCTGGAGAGGATTTCCAGGGCCGTGGAGCACGCCGGCCCGTGGCTGATCCTGGCGGGCTCGGGGGGCATCGCCGACGTGCTTGCTGCCCTGATGAACCAGCCCCACCTCCTTGTGCCCCAGGTGGCCAAGAAGCAGTTTAGAGAGACGTTCCCCAGTGAGAACTTCTCCTGGGAGGACATCGTGCACTGGACAGAACTGCTGCGGAACATCACCTCCCACCCGCACCTGCTCACCGTGCATGACTTCGAGCAGGAGGGCCCCGAGGAGCTGGACACGGTCATCCTCAAGGCGCTGTCCCGCCACCTGGAGGAGGTGATGATGGACGCGCTGGTGAGCAACAAGCCCCAGTTCGTGCGCCTCTTCGTGGACGGTGGCGCCGACGTGGCGGACTTCCTGACGTACGGGCGGCTGCAGCAGCTCTACCTCTCGGCGCCCCCCAAGAGCCTGCCCTTCCACCTGCTGCGGCGCAAGCGTGAGGAAGGCTGGCTGACGCTGGCCGGGCTGGGCACCCAGCAGGCCCGGGAGCCGCCCCCCTTCTCCCTGCACGAGGTGTCGCGGGTGCTCAAGGACTTCCTGCACGACGCCTGCCGTGGGCTCTACCAGGCGGTGAGCTGTGAGCGGGCGGCGGGGGGCCGGGCGGGGCCGCGGCTGCGGGCTGACACCCCCGTCCCCCAGGAACAGGGCCCGGCCCGGCGGCCCACGGGCCAGAAGGGGCTGCTGGACCTGAACCAGAGGAGCGAGAGCCCCTGGAGGGACCTGTTCCTGTGGGCGGTGCTGCAGAACCGCCACGAGATGGCTACCTACTTCTGGACCATGGGCCAGGAGGGCGTGGCAGCCGCTCTGGCCGCCTGCAGGATCCTCAAAGAGATGTCCCACCTGGAGACGGAGGCCGAGGTGGGCCGCACCCCGCGTGAGGCCAAGTACGAGCAGCTGGCCCTGGGAGCGCAGCCGAGGCACGAGGAGTGCACCTTCGCCCTGCTGGTGCGCCGGAACCACTCATGGAGCAGGACCACGTGTCTGCACCTGGCCACCGAGGCCGACACCAAGGCCTTCTTCGCCCACGACGGGGTGCAGGCCTTCCTGACCAAGATCTGGTGGGGGGACATGGCCTCGGGCACACCCATCCTGCGGCTGCTGGGCGCTTTCCTCTGCCCAGCCCTCGTGTTCACCGACCTCATCACCTTCAGGCCTGTCAGGACAGAGCGGCTGGGGGGCCTCGCGCTTCACTGGGGCTGGTGGCGGCATGAGGCCCCTCTAAGGACGGGCCCAGAGGACCCGCAGGGGCTGGACAGCCTGGACGCGGAGAAGAGGCTGCTCTGTGGCCCGGGCAGTCGGGCGGCGGAGCTGGCCAAGGCACTGAGGACTCAGAGCAGCCGGGGCCCACGAGCCGCCTTCTTGCTCAGGTGCTGGCGGAAGTTCTGGGGGGCGCCCGTGACCGTGTTCCTGGGGAACGTGATCATGTACTTCTCGTTCCTCTTCCTGTTCACCTATGTCCTGCTGGTGGACTTCAGGCCCCCTCCCCAGGGGCTGTCGGGGGCTGAGGTCACCCTCTACTTCTGGGTCTTTACGCTGGTGCTGGAGGAGATCTGGCAGGGCTTCTTCACAGATGAGGACACGCGCCTGGTGAAGAAGGTCACTCTCTACGTGGAGGACAACCGGAACAAGTGTGACATGGCGGCCATCTTCCTGTTCATCGTCGGTGTCACCTGCAGGTCTGTGGGTCCCAGAGGCCTGGCAGGGGCAGCCCTGCTGGGCTGGTGGGCCGGGCTGCCTTCAGGATGGGTCTGCTCAGGCCCCGGAAACCCTGTGTTTGTATGTCCCGTGCTGTGTGTCCTGGGGGAAGCCCCTGCCCTCTCTGGGCACCAGCAGCCGTCCAGCCTGCCTTACCCCCGCCCTGTCAGGATGCTGCCCTCGGTGTCTGAGGCCGGCCGCACGATCCTCGCCATCGACTTCATGGTGTTCACGCTCCGGCTCATCCACACCTTTGCCATCCACAAGCAGCTGGGCCCCAAGATCATCATCGTGGAGCGGATGGTGAGCCCCCGCTCCTGGGAGGGCAGTGAGGCCGAGGCCCACTGCCAGGCGGGGGCTGATGCTTCTCTCCCCACACGCCTACCCCCCGTGGAGATGAAGGACGTCTTTTTCTTCCTCTTCTTCCTGAGCGTGTGGCTTGTGGCCTACGGCGTGACCAGCCAGGCGCTGCTGCACCCCCATGACAGGCGCCTGGAGTGGATCTTCCGCTGTGTGCTCTACCGGCCGTACCTACAGATCATCAGGCAGATCCCACTGGACGAGATTGATGAAGCCCGCGTGAACCGCTCCGTGCACCCCCTGCTGCTGGAGGGCTCGCCCTCCTGCCCCAACCTCTACGCCAACCGGCTGGTCATCGTCCTGCTGGTCACCTTCCTGCTGGTCACCAACGTGCTGCTCGTGAACTTGTTCATTGCCACGTTCAGGGCAACGCGGACACCTTCTGTAAGTTCCAGCGCTACCACCTCATCGTGGAGTACCACCAGCGCCCCGCCCTGGCCCCGCCCCGGCCCCGCCCTTCATCCTCCTCAGCCACCTGAACCTGGTGCTCAAGAGGTTCTTCCGGAAGGAGGCCCAGCAGAAGCGGGCACGCCTGGAGAGGGACCTGCCGGAGCCCCTGGACCAGAAGATGGTCACCTGGGAGGCGGTGCAGAAGAACTTCCTGAGCGAGCTGGAGAAGCGGAGGAAGGACAGCGGGGAGGAGCTGCTGCGGAAGACGGCCCACAGGTGCGGGGACCCGGCCCGGCCCCGCCCCCCCGGTGGGCGTGGCAGGCGGCCTGGGACTCCCGGAACTTCAGTGGTGGGAACCCACAGGCCTCTGCTGCCCGTGGAGGGGGCCTGGGCAGCAGGAAACACCCAGAGGCCGGCCGGCTGCCCTCGAACACCTGA

Related Sequences

bmy_05031T0 SequenceType object (3)

Length: 1200 aa      View alignments
>bmy_05031T0
MQGAGGARPGSHGGAGDRQGPGLCRGEIEFGGSGKKRGKFVKVPSGVAPSVLFDLLLAEWHLPAPNLAVSLVGEERPFALKPWLRDVLRKGLVKAAQSTRAWILTSALRVGLARYVGQAVRDHSLASTSTEAAWWPSASPHSAACCTSASGRRPGGQPCPLPHGRWWPPGPPLRPGQRPGRPGEGSEPTERRLRLEKHISEQRTGYGRTGSIEIPVLCLLVNGDPSTLERISRAVEHAGPWLILAGSGGIADVLAALMNQPHLLVPQVAKKQFRETFPSENFSWEDIVHWTELLRNITSHPHLLTVHDFEQEGPEELDTVILKALSRHLEEVMMDALVSNKPQFVRLFVDGGADVADFLTYGRLQQLYLSAPPKSLPFHLLRRKREEGWLTLAGLGTQQAREPPPFSLHEVSRVLKDFLHDACRGLYQAVSCERAAGGRAGPRLRADTPVPQEQGPARRPTGQKGLLDLNQRSESPWRDLFLWAVLQNRHEMATYFWTMGQEGVAAALAACRILKEMSHLETEAEVGRTPREAKYEQLALGAQPRHEECTFALLVRRNHSWSRTTCLHLATEADTKAFFAHDGVQAFLTKIWWGDMASGTPILRLLGAFLCPALVFTDLITFRPVRTERLGGLALHWGWWRHEAPLRTGPEDPQGLDSLDAEKRLLCGPGSRAAELAKALRTQSSRGPRAAFLLRCWRKFWGAPVTVFLGNVIMYFSFLFLFTYVLLVDFRPPPQGLSGAEVTLYFWVFTLVLEEIWQGFFTDEDTRLVKKVTLYVEDNRNKCDMAAIFLFIVGVTCRSVGPRGLAGAALLGWWAGLPSGWVCSGPGNPVFVCPVLCVLGEAPALSGHQQPSSLPYPRPVRMLPSVSEAGRTILAIDFMVFTLRLIHTFAIHKQLGPKIIIVERMVSPRSWEGSEAEAHCQAGADASLPTRLPPVEMKDVFFFLFFLSVWLVAYGVTSQALLHPHDRRLEWIFRCVLYRPYLQIIRQIPLDEIDEARVNRSVHPLLLEGSPSCPNLYANRLVIVLLVTFLLVTNVLLVNLFIATFRATRTPSVSSSATTSSWSTTSAPPWPRPGPALHPPQPPEPGAQEVLPEGGPAEAGTPGEGPAGAPGPEDGHLGGGAEELPERAGEAEEGQRGGAAAEDGPQVRGPGPAPPPRWAWQAAWDSRNFSGGNPQASAARGGGLGSRKHPEAGRLPSNT*