Sequence details bmy_05046 (Coding sequence)

Part of scaffold_174 (Scaffold)

For more information consult the page for scaffold_174 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.44938 ENSBTAG00000003915 (Cow)

Gene Details

la-related protein 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005109, Cow)

Protein Percentage 92.72%
cDNA percentage 90.86%
Ka/Ks Ratio 0.11336 (Ka = 0.0423, Ks = 0.3736)

LARP6  (Minke Whale)

Gene Details

La ribonucleoprotein domain family, member 6

External Links

Gene match (Identifier: BACU017950, Minke Whale)

Protein Percentage 96.36%
cDNA percentage 97.09%
Ka/Ks Ratio 0.38372 (Ka = 0.0226, Ks = 0.059)

Additional orthologs identified in other species via the OPTIC pipeline.

LARP6 (Human)   Larp6 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1239 bp    Location:1453896..1439744   Strand:-
Raw sequence 
>bmy_05046
ATGGCAGAAGACAGGATTAGAGAGGAAGAGACGAGTCAAAAGGAACTTCACACAATGATCGAATTCTACTTTTCTGATGAAAACCTGGAGAAGGACGCCTTCCTGCTGAAGCACGTGAGGAGGAACAAGCTGGGGTATGTGAGTGTCAAGCTACTCACATCCTTCAAAAAGGTGAAACACCTTACACGGGACTGGAGAACCACAGCACATGCCTTGAAGTACTCAGTGACCCTCGAGTTGAATGAGGACCACCGGAAGGTGAGGAGGACCACCCCTGTCCCACTCTTCCCCAACGAGAACCTCCCCAGCAAGATGCTCCTGGTCTATGACCTCTACCTGTCCCCCAAGCTGTGGGCCCTGGCCACCCCCCAGAAGAATGGAAGGGTGCAGGAGAAGGTGATGGAACACCTGCTCAAGCTCTTCGGGACCTTTGGAGTCATCTCGTCAGTGCGAATCCTCAAACCCGGGAGAGAGCTGCCCCCCGATATCCGGAAGATCAGCAGCCGGTATAGCCAGGTGGGGACCCAAGAGTGCGCCATTGTGGAGTTCGAGGAGGTGGAAGCGGCCATCAAAGCCCATGAGTTCATGATCACAGAATCTCAGGGCCGGGAGAGCATGAAAGCTGTCCTGATTGGTATGAAGCCACCCAAAAAGAAACCATCCAAAGAGAAGAACCAGGACGAAGAACCCACTTCGAGCATCCACCTGAACAAGTCCCTAAACAGGAGAGTTGAGGAGCTTCAGTACGTGGGGGATGAGTCTTCCGCCAACAGCTCCTCCGACCCCGAGAGCAATCCCACGTCCCCCATGGCTGGCCGGCGACCTGCAGTCACCAACAAGCTCAGCCCTTCTGGCCACCAGAATCTCTTTCTGAGCCCGAATGCCTCCCCGTGCTCAAGTCCTTGGAGCAGCCCCTTGGCTCAACGAAAAGGCGTTTCCAGAAAATCCCCACTGGCCGAAGAAGGTAGGCCGAACTCCAGCGCCAGTCCTGAGATCTTTCGCAAGTGCATGGATTATTCCTCGGACAGCAGCGTCACTCCCTCTGGCAGCCCCTGGGTTCGGAGGCGCCGCCAGGCTGAGATGGGGACGCGGGAGAAGAGCCCCAGAGCGAGTCCCCTGCTCTCTCGGAAGATGCAGACTGCAGATGGGCTCCCTGTGGGGGTGCTGAGGTTGCCCAGAGGCCCTGACAACACCAGAGGATTCCACAGTGGACACGAGAGGAGCAGGGCCTGTGTATAA

Related Sequences

bmy_05046T0 Protein

Length: 413 aa      View alignments
>bmy_05046T0
MAEDRIREEETSQKELHTMIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKPGRELPPDIRKISSRYSQVGTQECAIVEFEEVEAAIKAHEFMITESQGRESMKAVLIGMKPPKKKPSKEKNQDEEPTSSIHLNKSLNRRVEELQYVGDESSANSSSDPESNPTSPMAGRRPAVTNKLSPSGHQNLFLSPNASPCSSPWSSPLAQRKGVSRKSPLAEEGRPNSSASPEIFRKCMDYSSDSSVTPSGSPWVRRRRQAEMGTREKSPRASPLLSRKMQTADGLPVGVLRLPRGPDNTRGFHSGHERSRACV*