Part of scaffold_174 (Scaffold)

For more information consult the page for scaffold_174 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THAP10 ENSTTRG00000014089 (Bottlenosed dolphin)

Gene Details

THAP domain containing 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013358, Bottlenosed dolphin)

Protein Percentage 83.53%
cDNA percentage 88.09%
Ka/Ks Ratio 0.76023 (Ka = 0.1222, Ks = 0.1608)

THAP10 ENSBTAG00000040208 (Cow)

Gene Details

THAP domain-containing protein 10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048404, Cow)

Protein Percentage 37.14%
cDNA percentage 52.76%
Ka/Ks Ratio 0.42777 (Ka = 0.6874, Ks = 1.6069)

THAP10  (Minke Whale)

Gene Details

THAP domain containing 10

External Links

Gene match (Identifier: BACU017949, Minke Whale)

Protein Percentage 80.77%
cDNA percentage 86.04%
Ka/Ks Ratio 0.90017 (Ka = 0.1532, Ks = 0.1702)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 807 bp    Location:1496453..1479600   Strand:-
>bmy_05047
ATGGGCCCGCGCGAAATTTGTATCCCTCTGCCTGTGGCCCCCTGCTCTCAGGGGAAGCTGCAGGGAGGAGGAGGATCTCCGAGAGCCGGGTACTTTCCCAGGTGGGGCCGCAGTTCGGCACTTCCGGCGGCCGGAGGTAGGGGAAGGAGACAAGGTGTAGACTGGTACGAGGCCAATGACAGCTCGGTCATCTGCTCCGACCACTTTGCTCCCGCCTGTTTTGACGTCTCTTCGGTTATCCCGAAGAACCTGCGCTTCTCCCAGCGCCTGAGGTTCGTGGCGGGCGCCGTGCCCACCCTGCACCGGGTGTCCTCCCCGGTATCTAAGGGGCAAGAAGAGGGAGACGGGGTGGGCGGCCCCGAGCAGGGAGGCGAGCCCCAGGCAGTCAGGCAGCCCGAGGCTGCCCCGAGGCCAGCCTGCTGTACACTCTTCCGGGCCAGGAAGAGGGCTGCGGCTTCACAGATTGCACATGAAAATCAAGTTATACAAACACAAGTCCATGCTGATAATCTATCTAATGATGTCACTTCAGTACCTACTCACTGTGAGGAAGGCCCAGTGCGCAAAAGTACACAAATATCTCTGAAGAGACCCCCTCACTACAGTGTGGGTATTCAGGCCAAAGTGAAAGTGTTTGGAACACGACTATGTAATGCAACTACTCAGACTGATGACTTGTGGTCTAGAACGTCCTCTCTCTTTGACACTTACTCCAGTGACTCAGAAACAGATGAGGACTGGGATATCAAGAGTGAACAGAGTGATTTGTCTTACATAGCTGTACAGGTAAAAGAAGAGACCTGTTAA

Related Sequences

bmy_05047T0 Protein

Length: 269 aa      View alignments
>bmy_05047T0
MGPREICIPLPVAPCSQGKLQGGGGSPRAGYFPRWGRSSALPAAGGRGRRQGVDWYEANDSSVICSDHFAPACFDVSSVIPKNLRFSQRLRFVAGAVPTLHRVSSPVSKGQEEGDGVGGPEQGGEPQAVRQPEAAPRPACCTLFRARKRAAASQIAHENQVIQTQVHADNLSNDVTSVPTHCEEGPVRKSTQISLKRPPHYSVGIQAKVKVFGTRLCNATTQTDDLWSRTSSLFDTYSSDSETDEDWDIKSEQSDLSYIAVQVKEETC*