Part of scaffold_173 (Scaffold)

For more information consult the page for scaffold_173 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000009971 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009455, Bottlenosed dolphin)

Protein Percentage 73.84%
cDNA percentage 74.82%
Ka/Ks Ratio 0.13439 (Ka = 0.0046, Ks = 0.0343)

RAB23 ENSBTAG00000005362 (Cow)

Gene Details

ras-related protein Rab-23

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007050, Cow)

Protein Percentage 98.31%
cDNA percentage 95.22%
Ka/Ks Ratio 0.03687 (Ka = 0.0076, Ks = 0.206)

RAB23  (Minke Whale)

Gene Details

RAB23, member RAS oncogene family

External Links

Gene match (Identifier: BACU012254, Minke Whale)

Protein Percentage 97.0%
cDNA percentage 97.88%
Ka/Ks Ratio 0.67139 (Ka = 0.0198, Ks = 0.0295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:836887..762978   Strand:-
>bmy_05055
ATGATCTTGCTGAGTTATTGTTTGATCCCTCGGAGCTCTGAGATCCCAGCAGTTGTGCTAAACCAGGAACCTAGACTGGCCAATCTCTCGGAGCTAGAGAAGGAAAACCTAGATTTGAGAGAGAAGATCGGATCACCTGGAATTAAATTTGGCACAGAAACCTTTTCAACTCCAAAAATGTTGGAGGAAGATATGGAAGTGGCCATAAAGATGGTGGTTGTAGGGAATGGCGCAGTTGGAAAATCAAGTATGATTCAGCGGTATTGCAAAGGCATTTTTACAAAAGACTACAAGAAAACCATCGGAGTTGATTTTTTGGAGCGACAGATACAAGTTAATGATGAAGACGTCAGGCTCATGTTATGGGATACGGCAGGTCAAGAGGAGTTTGATGCAATAACAAAGGCCTACTATCGAGGAGCCCAGGCTTGTGTGCTTGTATTTTCCACCACAGACAGGGAATCTTTTGACGCGATTTCCAGTTGGAGAGAGAAGGTGGTGGCTGAAGTTGGAGATATACCAACTGTACTTGTACAAAACAAGATCGATCTCCTTGATGACTCTTGTATAAAGAATGAGGAAGCTGAGGCACTGGCAAAAAAGTTGAAGCTGAGATTCTACAGGACTTCAGTGAAGGAGGATCTGAACGTGACGGAAGTTTTTAAATATTTGGCTGAAAAATATCTTCAAAAGCTTAAACAACAAATAGCTGAGGATCCTGAATCAATGCATTCAAGTAGTAACAAAATTGGTGTCTTTAGCACGTCTGCTGGGAGTCACTTGGGTCAGAATTCAAGTACCCTTAATGGTGGAGATGTCATCAACCTCAGGCCCAACAGACAGAGGACCAAGAAAAACCGAAATCCTTTTAGCAGCTGTAGCATACCCTAA

Related Sequences

bmy_05055T0 Protein

Length: 297 aa      View alignments
>bmy_05055T0
MILLSYCLIPRSSEIPAVVLNQEPRLANLSELEKENLDLREKIGSPGIKFGTETFSTPKMLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFDAISSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVTEVFKYLAEKYLQKLKQQIAEDPESMHSSSNKIGVFSTSAGSHLGQNSSTLNGGDVINLRPNRQRTKKNRNPFSSCSIP*