Part of scaffold_180 (Scaffold)

For more information consult the page for scaffold_180 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ADRA1A ENSTTRG00000004828 (Bottlenosed dolphin)

Gene Details

adrenoceptor alpha 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004551, Bottlenosed dolphin)

Protein Percentage 90.42%
cDNA percentage 92.71%
Ka/Ks Ratio 0.35498 (Ka = 0.0598, Ks = 0.1686)

ADRA1A ENSBTAG00000031632 (Cow)

Gene Details

alpha-1A adrenergic receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042306, Cow)

Protein Percentage 90.72%
cDNA percentage 89.42%
Ka/Ks Ratio 0.11678 (Ka = 0.0578, Ks = 0.4946)

ADRA1A  (Minke Whale)

Gene Details

adrenoceptor alpha 1A

External Links

Gene match (Identifier: BACU015289, Minke Whale)

Protein Percentage 91.02%
cDNA percentage 92.32%
Ka/Ks Ratio 0.35173 (Ka = 0.0636, Ks = 0.1809)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1005 bp    Location:1237861..1236857   Strand:-
>bmy_05081
ATGGTGTTTCTCTCTGGAAATGCCTCGGACAGCTCCAACTGCACCCACCCGCCGCCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATCCTTTTCGGGGTACTGGGGAACATCCTTGTGATCCTTTCCGTGGCCTGCCACCGGCATCTGCACTCGGTCACTCACTACTACATCGTCAACCTGGCGGTGGCCGACCTTCTACTCACTTCCACGGTGCTGCCCTTCTCCGCAATCTTCGAGATCTTGGGCTACTGGGCCTTTGGCAGGGTTTTCTGCAATATCTGGGCGGCGGTGGACGTCCTGTGCTGCACTGCGTCCATCATGGGACTCTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTACCCGCTGCGCTACCCCACAATCGTCACGCAGAAGAGGGGTCTCATGGCTCTGCTCTGCGTCTGGGCGCTCTCCCTGGTCATCTCCATCGGGCCTCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAATGAGGAGCCGGGCTACGTGCTCTTCTCCGCGCTCGGCTCCTTCTACGTGCCGCTGACCATCATCCTCGTCATGTACTGCCGGGTCTACGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCCGGCCTCAAGACCGACAAGTCGGACTCGGAGCAGGTGACGCTCCGCATCCATCGCAAAAATGCCCCGGTAGGAGGCAGGGGGTTGCCCAGCGCCAAGAACAAGACACACTTCTCCGTGAGACTCCTCAAGTTTTCCCGGGAGAAGAAAGCGGCCAAAACACTGGGTATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCTTAGTGATGCCCATTGGTAAGTCTTTACAGCACCTCGTTTTAGCATTTAGGAGTCTTCACCCTCTTCCCATTATGCTACCCCAGACTCACAGTCAGGGGTGGAAGAGAAAGGATCTGCATTTCAAACAGCAAAGCTAG

Related Sequences

bmy_05081T0 Protein

Length: 335 aa      View alignments
>bmy_05081T0
MVFLSGNASDSSNCTHPPPPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEILGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQKRGLMALLCVWALSLVISIGPLFGWRQPAPEDETICQINEEPGYVLFSALGSFYVPLTIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPVGGRGLPSAKNKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGKSLQHLVLAFRSLHPLPIMLPQTHSQGWKRKDLHFKQQS*