Part of scaffold_180 (Scaffold)

For more information consult the page for scaffold_180 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM35 ENSTTRG00000003197 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 35

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002997, Bottlenosed dolphin)

Protein Percentage 99.42%
cDNA percentage 98.54%
Ka/Ks Ratio 0.02826 (Ka = 0.0023, Ks = 0.083)

TRIM35 ENSBTAG00000009958 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013134, Cow)

Protein Percentage 93.88%
cDNA percentage 91.64%
Ka/Ks Ratio 0.04572 (Ka = 0.0266, Ks = 0.5813)

TRIM35  (Minke Whale)

Gene Details

tripartite motif containing 35

External Links

Gene match (Identifier: BACU015285, Minke Whale)

Protein Percentage 99.13%
cDNA percentage 98.35%
Ka/Ks Ratio 0.04103 (Ka = 0.0036, Ks = 0.0867)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1032 bp    Location:1567168..1559759   Strand:-
>bmy_05087
ATGGAACACGCGCTGCGGGAGAAAGCCAAGGCCTTCTGGGCCATGCGGCGCTCCTACGAGGCCATCGCCAAGCACAATCAGGTGGAGGCTGCCTGGCTGGAAGGGCGAATCCGGCAGGAGTTTGACAAGCTTCGAGAGTTCTTGAGAGTGGAGGAGCAGGCCATCCTGGATGCCATGGCCGAGGAGGCCAGGCAGAAGCAGCTTCTGGCCGAGGAGAAGATGAAGCGGCTGGCGGAAGACACGGAGGCCCTGGCCCATGAGATTGAGCGGCTGCAGATGGAGATGAAGGAGGACGACGTTTCCTTTCTCATGAAACACAAGAGCCGAAAACGCCGCCTCTTCTGCACGATGGAGCCGGAGCCTGTCCAACCTGGTATGCTCATCGACGTTTGCAAGTACCTGGACTCCCTGCAGTACCGAGTCTGGAGGAAGATGCTCGTGTGTGTCGAATCTGTGCCTTTCAGCTTTGATCCCAACACTGCGGCTGGCTGGCTCTCCGTGTCAGACGACCTCACCAGTGTCACCAACCACGGCTACCGGGTCCAGGTAGAGAATCCGGAGCGCTTCTCATCAGCGCCCTGCCTGCTGGGCTCCTGCGTCTTGTCGCAGGGCTCGCATGCCTGGGAGGTGGACCTGGGGGCACTGCCGAGCTGGCGCGTGGGCGTGGTGCGGACGCGTCAGGACGCGGGCGCGGAGGGCCACTCGCACAGCTGCTACCACGACACGCGCTCGGGCTTCTGGTACGTGTGCCGCACGCAGGGCGTGGACGGCGACCACTGCGTGACCTCGGACCCCGCCACATCGCCCCTGGTCCCGGCCATCCCGCGCCGCCTGCGCGTGGAGTTGGAGTGCGAGGAGGGTGAGCTGTCCTTCTACGACGCGGAGCGCCACTGCCACCTGTACACCTTCCACGCCCGCTTTGGGGAGGTGCGGCCCTACTTCTACCTGGGCGGCTCGCGGGGGGACGGGCCCCCCGAGCCGCTGCGCATCTGCCCCCTGCGCATCACCGTCAAGGAGGAGCTGGATGGCTGA

Related Sequences

bmy_05087T0 Protein

Length: 344 aa      View alignments
>bmy_05087T0
MEHALREKAKAFWAMRRSYEAIAKHNQVEAAWLEGRIRQEFDKLREFLRVEEQAILDAMAEEARQKQLLAEEKMKRLAEDTEALAHEIERLQMEMKEDDVSFLMKHKSRKRRLFCTMEPEPVQPGMLIDVCKYLDSLQYRVWRKMLVCVESVPFSFDPNTAAGWLSVSDDLTSVTNHGYRVQVENPERFSSAPCLLGSCVLSQGSHAWEVDLGALPSWRVGVVRTRQDAGAEGHSHSCYHDTRSGFWYVCRTQGVDGDHCVTSDPATSPLVPAIPRRLRVELECEEGELSFYDAERHCHLYTFHARFGEVRPYFYLGGSRGDGPPEPLRICPLRITVKEELDG*