Part of scaffold_180 (Scaffold)

For more information consult the page for scaffold_180 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRNA2 ENSTTRG00000002378 (Bottlenosed dolphin)

Gene Details

cholinergic receptor, nicotinic, alpha 2 (neuronal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002227, Bottlenosed dolphin)

Protein Percentage 90.58%
cDNA percentage 93.41%
Ka/Ks Ratio 0.20725 (Ka = 0.0474, Ks = 0.2286)

BT.68771 ENSBTAG00000002252 (Cow)

Gene Details

neuronal acetylcholine receptor subunit alpha-2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002910, Cow)

Protein Percentage 85.11%
cDNA percentage 87.84%
Ka/Ks Ratio 0.1612 (Ka = 0.0841, Ks = 0.5214)

CHRNA2  (Minke Whale)

Gene Details

cholinergic receptor, nicotinic, alpha 2 (neuronal)

External Links

Gene match (Identifier: BACU015283, Minke Whale)

Protein Percentage 93.62%
cDNA percentage 94.33%
Ka/Ks Ratio 0.17963 (Ka = 0.0379, Ks = 0.2112)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:1730119..1720184   Strand:-
>bmy_05089
ATGGGCCCCGCCCGCCCTGCACTCCCGTCCACGACAAAGCTCGGGCTGTGGTGGCTTTTTCTGATCCCGGCAGCATCCGTGCAACAGGCCTCTCCCACCCAAGCCGAGGACCGCCTCTTCCAACACCTCTTTAGGGGCTACAACCGCTGGACGAGGCCGGTGCCCAACACCTCGGACGTGGTGATCGTGCACTTCGGGCTGTCCATCGCCCAGCTCATCGATGTGGATGAGAAGAACCAAATGATGACCACCAAAGTCTGGCTAAAGCAGGAGTGGAACGACTACAAGCTGCGCTGGAACCCGGCCGATTTCGGCAACATCACATCCCTCCGTGTCCCTTCGGAAATGATCTGGATCCCCGACATCGTCCTCTACAACAATGCAGATGGGGAGTTCGTGGTGACCCACATGACCAAGGCCCACCTCTTCTCCTCGGGCACCGTGCACTGGGTACCGCCCGCCATCTACAAGAGCTCCTGCAGCATGGACGTCACCTTCTTCCCCTTCGACCAGCAGAACTGCAAGATGAAGTTCGGCTCCTGGTCGTATGACAAGGCCAAGATCGACCTGGTGCAGACGGAGCAGACGGTAGACCTCAAGGACTACTGGGAGAGCGGCGAGTGGGCCATCGTCAACGCCACGGGCACCTACAACACCAAGAAGTATGACTGCTGCGCCGAGATCTACCCTGATGTCACCTACTACTTCGTCATCCGGCGCCTGCCGCTCTTCTACACCATCAACCTCATCATCCCCTGCCTGCTCATCTCCTGCCTCACGTGCCATTCTTACAGGGGCTGCGCATGGGAGGGACACCTCCCCTTTCCCAAGGCCTCGGTCACTGTGCGCCCATCTCCCCTGCAGGTGAAGGAAGACTGGAGGTATGTGGCCATGGTCATCGATAGGATATTCTTCTGGTTGTTTATCCTCGTTTGCTTCCTGGGGACCATCGGACTCTTTCTCCCTCCGTTCCTAGCTGGAATGATCTGA

Related Sequences

bmy_05089T0 Protein

Length: 330 aa      View alignments
>bmy_05089T0
MGPARPALPSTTKLGLWWLFLIPAASVQQASPTQAEDRLFQHLFRGYNRWTRPVPNTSDVVIVHFGLSIAQLIDVDEKNQMMTTKVWLKQEWNDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYNNADGEFVVTHMTKAHLFSSGTVHWVPPAIYKSSCSMDVTFFPFDQQNCKMKFGSWSYDKAKIDLVQTEQTVDLKDYWESGEWAIVNATGTYNTKKYDCCAEIYPDVTYYFVIRRLPLFYTINLIIPCLLISCLTCHSYRGCAWEGHLPFPKASVTVRPSPLQVKEDWRYVAMVIDRIFFWLFILVCFLGTIGLFLPPFLAGMI*