Part of scaffold_182 (Scaffold)

For more information consult the page for scaffold_182 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIP13 ENSTTRG00000008987 (Bottlenosed dolphin)

Gene Details

thyroid hormone receptor interactor 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008527, Bottlenosed dolphin)

Protein Percentage 87.26%
cDNA percentage 88.85%
Ka/Ks Ratio 0.31722 (Ka = 0.0336, Ks = 0.1059)

TRIP13 ENSBTAG00000006972 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045731, Cow)

Protein Percentage 95.22%
cDNA percentage 92.04%
Ka/Ks Ratio 0.0764 (Ka = 0.0226, Ks = 0.2957)

TRIP13  (Minke Whale)

Gene Details

thyroid hormone receptor interactor 13

External Links

Gene match (Identifier: BACU014736, Minke Whale)

Protein Percentage 94.65%
cDNA percentage 94.87%
Ka/Ks Ratio 0.48547 (Ka = 0.0418, Ks = 0.0861)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 945 bp    Location:738974..753727   Strand:+
>bmy_05109
GAGGCCGTGGGCGACCTGAAGCAGGCGCTGCCCTGCGTGGCCGAGGCGCCGACCGTCCATGTGGAGGTCCACCAGCGGAGCGGCAGCACTGCAAAAACAGAAGATCTAAAGCTGAGTGTGAGGAAGCTYCTCAACAGGCATAATATTGTGTTCGGCGATTACGCGTGGACTGAGTTTGATGAGCCTTTTCTGACCAGAAATGTGCAGTCTGTGTCCATTGTTGACACGGAATTAAAGGCTAAAGATCCACAGCCCATTGATTTGAGCACGTGCACCATTGCACTTCACATCTTCCAGCTGAATGAAGATGGCCCCAGCAGTGAAAATCTGGAGGAAGAGACAGAGAATATAATTGCGGCAAACCATTGGGTGCTGCCTGCAGTTGAATTCCATGGACTTTGGGACAGCCTGGTGTATGATGTGGAAGTCAAATCTCACCTCCTTGACTATGTGATGACAACTTTACTGTTTTCAGACAAGAAGGTCGACAGCAATCTCATCACCTGGAACCGGGTGGTGCTGCTTCATGGTCCTCCAGGAACTGGAAAAACATCCCTGTGTAAAGCTTTAGCCCAGAAATTGACCATCAGACTCTCAAGCAGGTACCGGTATGGCCAGTTAATCGAAATAAACAGCCACAGCCTGTTCTCTAAGTGGTTTTCAGAATGTCAGATCATATACCCTCGCCAGCAGCTGCTGACCCTCCGCGAGCTGGAGATGATTGGCTTCATTGAAAACAACGTGTCCAAGTTGAGCCTCCTTCTGAGTGAAATTTCAAGGAAGAGTGAGGGCCTCAGCGGCCGTGTCCTGAGAAAACTCCCTTTTCTGGCTCACGCTCTGTACGTCCAGGCCCCCAGCATCACCATCGAGGGCTTCCTCCAGGCCCTGTCTCTGGCCGTGGACAAGCAGTTTGAAGACAGAAAGAAGCTCTCGTCGTGCGTGTGA

Related Sequences

bmy_05109T0 Protein

Length: 315 aa      View alignments
>bmy_05109T0
EAVGDLKQALPCVAEAPTVHVEVHQRSGSTAKTEDLKLSVRKLLNRHNIVFGDYAWTEFDEPFLTRNVQSVSIVDTELKAKDPQPIDLSTCTIALHIFQLNEDGPSSENLEEETENIIAANHWVLPAVEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKKVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSECQIIYPRQQLLTLRELEMIGFIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYVQAPSITIEGFLQALSLAVDKQFEDRKKLSSCV*