Part of scaffold_182 (Scaffold)

For more information consult the page for scaffold_182 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRX4 ENSTTRG00000001981 (Bottlenosed dolphin)

Gene Details

iroquois homeobox 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001859, Bottlenosed dolphin)

Protein Percentage 97.23%
cDNA percentage 97.36%
Ka/Ks Ratio 0.10397 (Ka = 0.0115, Ks = 0.1108)

IRX4 ENSBTAG00000015907 (Cow)

Gene Details

iroquois-class homeodomain protein IRX-4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021145, Cow)

Protein Percentage 92.86%
cDNA percentage 92.33%
Ka/Ks Ratio 0.07134 (Ka = 0.0309, Ks = 0.4331)

IRX4  (Minke Whale)

Gene Details

iroquois homeobox 4

External Links

Gene match (Identifier: BACU014725, Minke Whale)

Protein Percentage 98.02%
cDNA percentage 98.28%
Ka/Ks Ratio 0.14757 (Ka = 0.0089, Ks = 0.0606)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1521 bp    Location:1393296..1389540   Strand:-
>bmy_05122
ATGACCACCAACTCCCTGAGCACGTGCTGCGAATCCGGTGGCCGCACGCTGGCCGAGTCCAGGCCGGCTGCCTCGGCCCAGGCGCCCGTCTACTGCCCGGTCTACGAGAGCCGGCTGCTGGCCACAGCGCGCCACGAGCTGAACTCAGCAGCGGCGCTTGGCGTCTACGGGGGCCCCTACGGCGGCTCGCAGGGCTACGGCAACTACGTGACCTACGGTTCTGAGGCGTCTGCCTTCTACTCGCTGAACAGCTTCGACTCCAAGGACGCACCGGGATCTGCGCATGCGGGCCTCGCTCCAGCTGCAGCCACAGCCTACTACCCCTACGAGCCGGCGTTGGGCCAGTACCCCTACGACAGGTACGGGACCATGGACAGCGGCACGCGGCGGAAGAACGCCACGCGCGAGACCACCAGCACGCTCAAGGCCTGGCTGCAGGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCACGCAGGTCTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTCAAGAAGGAGAACAAGATGACATGGCCGCCGAGGAACAAGTGTGCGGATGAGAAGCGGCCCTACGCGGAGGGCGAGGAGGAAGAGGGGGGCGAGGAGGAAGCCAGGGAGCAGCCCCTCAAGAGCACCAAAGGTGCAGAGCCGATAGGCAAAGAGAAGGATCTGGAGCTCAGCGACTTGGAGGACTTCGACCCCCTGGAGGGGGAGCCCCCAGAGTGCGAGCTGAAGCCGCCCTTCCAGCCCCTGGACGGAGGCCTGGATCGAGTCCCCACCGTGCCAGACGGCCCCAGCGCCCCAGGGAAGGAGGCTCCGGGCGCCCTCCGGATGCCCCTGGCCGCCGCCGGGGGTGGGGCCACTCTGGACCAGGACCTGGAGAGGGCCCGGAGCTGCCTCCGGAGCACGGCGGCTGGGCCGGAGCACCAGGCGGGCGCGGGCGCGGGGGTTGGCCCACAGGCCTGCGAGCCCAAGCTGGGCTTTGCTCCGGCTGGGGCGTCGGCGGGCCTCGAGGCCAAGCCGCGCATCTGGTCCCTGGCACACACGGCCACCGCGGCCGCCGCCACCGCCCTCGGCCAGACTGAGTTTCCCTCGTGCATGCTCAAGCGCCAAGGCCCCGCTGGCCCTGCGGCCCCCTCCTCGGCGCCCACCTCCTCCTCGCCTGCGGCCCCGGCTCCCGCCGGTGCCCTGGACAGGCACCAGGACTCCCCGGTAACCAGTCTCAGAAACTGGGTGGACGGGGTCTTCCACGACCCCATCCTCAGACACAGCACTTTGAACCAGGCCTGGGCCACCGCCAAGAGCGCCCTCCTGGACCCTGGGCCGCTGGGCCGCTCGCTGGGGGGAGGCGCCAACGTGCTGACGTCGCCCCTGGCGCGCTCCTTCCCGCCCGCCGCGCCCCAAGACGCCCCCGCCTCCGGCGCAGCCAAGGAGCTGCTGGCCACGCCCAAGGCCGGCGGCAAGCCCTTCTGCGCCTAG

Related Sequences

bmy_05122T0 Protein

Length: 507 aa      View alignments
>bmy_05122T0
MTTNSLSTCCESGGRTLAESRPAASAQAPVYCPVYESRLLATARHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDAPGSAHAGLAPAAATAYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEAREQPLKSTKGAEPIGKEKDLELSDLEDFDPLEGEPPECELKPPFQPLDGGLDRVPTVPDGPSAPGKEAPGALRMPLAAAGGGATLDQDLERARSCLRSTAAGPEHQAGAGAGVGPQACEPKLGFAPAGASAGLEAKPRIWSLAHTATAAAATALGQTEFPSCMLKRQGPAGPAAPSSAPTSSSPAAPAPAGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKSALLDPGPLGRSLGGGANVLTSPLARSFPPAAPQDAPASGAAKELLATPKAGGKPFCA*