Part of scaffold_177 (Scaffold)

For more information consult the page for scaffold_177 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COLEC10 ENSTTRG00000007215 (Bottlenosed dolphin)

Gene Details

collectin sub-family member 10 (C-type lectin)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006827, Bottlenosed dolphin)

Protein Percentage 99.12%
cDNA percentage 98.38%
Ka/Ks Ratio 0.09378 (Ka = 0.0041, Ks = 0.044)

COLEC10 ENSBTAG00000017343 (Cow)

Gene Details

collectin-10 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023054, Cow)

Protein Percentage 95.78%
cDNA percentage 92.26%
Ka/Ks Ratio 0.07506 (Ka = 0.023, Ks = 0.306)

COLEC10  (Minke Whale)

Gene Details

collectin sub-family member 10 (C-type lectin)

External Links

Gene match (Identifier: BACU013203, Minke Whale)

Protein Percentage 98.84%
cDNA percentage 98.84%
Ka/Ks Ratio 0.26406 (Ka = 0.0057, Ks = 0.0216)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 834 bp    Location:831101..791591   Strand:-
>bmy_05131
ATGGGTGGCTTTGGAGCCTATTTTCGAAGGAATCAGTTCATCCTCCTGGTGCTCTTTCTTTTGCAAATTCAGAGTCTGGGTCTGGACATTGATAGTCGTCCTACGGCTGAAGTCTGTGCCACACACACAGTTTCACCAGGACCCAAAGGAGATGAGGGTGAAAAAGGAGATCCAGGAGAGGAGGGAAAGCATGGCAAAGTGGGACGCATGGGGCCRAAAGGAATTAAAGGAGAACTGGGTGATGTAGGAGACCAAGGCAATATTGGCAAGACCGGGCCCATTGGCAAGAAGGGTGACAAAGGGGAAAAGGGTTTGCCTGGGATACCTGGAGGAAAAGGCAAAGCAGGGACTGTCTGTGATTGCGGAAGATACCGAAAAGTTGTTGGACAACTGGATATCAGTGTGGCTCGCCTCAAGACATCGATGAAGTTTGTCAAGAATGTCATAGCAGGGATTCGGGAAACCGAAGAGAAATTCTACTACATCGTTCAGGAGGAAAAGAACTACAGGGAATCCCTGACCCACTGCCGGATCCGGGGTGGAATGCTAGCCATGCCGAAGGACGAAGCTGCCAACACGCTCCTGGCAGACTATGTCTCCAAGAGTGGCTTCTTCCGGGTGTTCATCGGGGTGAATGACCTCGAGAGAGAGGGCCAGTATGTGTTCACCGACAACACTCCACTGCAGAACTACAGCAACTGGAAGGAGGGTGAGCCCAGCGACCCCTACGGCCACGAGGACTGCGTGGAAATGCTGAGTTCAGGCAGGTGGAATGACACAGAGTGCCATCTTACCATGTACTTTGTCTGTGAGTTTGTCAAGAAGAAAAAGTAA

Related Sequences

bmy_05131T0 Protein

Length: 278 aa      View alignments
>bmy_05131T0
MGGFGAYFRRNQFILLVLFLLQIQSLGLDIDSRPTAEVCATHTVSPGPKGDEGEKGDPGEEGKHGKVGRMGPKGIKGELGDVGDQGNIGKTGPIGKKGDKGEKGLPGIPGGKGKAGTVCDCGRYRKVVGQLDISVARLKTSMKFVKNVIAGIRETEEKFYYIVQEEKNYRESLTHCRIRGGMLAMPKDEAANTLLADYVSKSGFFRVFIGVNDLEREGQYVFTDNTPLQNYSNWKEGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCEFVKKKK*