Part of scaffold_177 (Scaffold)

For more information consult the page for scaffold_177 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF11B ENSTTRG00000000224 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor receptor superfamily, member 11b

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000208, Bottlenosed dolphin)

Protein Percentage 91.67%
cDNA percentage 93.4%
Ka/Ks Ratio 0.36239 (Ka = 0.0502, Ks = 0.1386)

TNFRSF11B ENSBTAG00000007423 (Cow)

Gene Details

Tumor necrosis factor receptor superfamily member 11B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009759, Cow)

Protein Percentage 88.19%
cDNA percentage 88.08%
Ka/Ks Ratio 0.22486 (Ka = 0.0771, Ks = 0.3431)

TNFRSF11B  (Minke Whale)

Gene Details

tumor necrosis factor receptor superfamily, member 11b

External Links

Gene match (Identifier: BACU013201, Minke Whale)

Protein Percentage 94.1%
cDNA percentage 95.02%
Ka/Ks Ratio 0.41498 (Ka = 0.04, Ks = 0.0964)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 867 bp    Location:956906..964137   Strand:+
>bmy_05133
ATGGTATCTGCTGCGAAAGTATTTGAGAAGAATGTGCTAAATGGCTTGGTATTTTCTGTAGGAACCCCAGAGCGAAATACAGTTTGCAAAAGATGTCCAGATGGGTTCTTCTCCAATGAGACGTCATCTAAAGCACCCTGTAGAAAGCACACAAATTGCAGTGCATTTGGGCTCCTTCTAACCCAGAAGGGAAATGCAACGCATGACAATATATGTTCTGGAAACAGTGAACCGACTCACAAATGTGGAATAGACATGACCCTGTGTGAGGAGGCATTCTTTAGGTTTGCTGTTCCCACAAAGCTTACCCCGAACTGGCTCAGTGTCCTGGTAGACAATTTGCCTGGCACCAAAGTGAACGCAGAGAGCATAGAGAGGATAAAACGACGACACAGCTCACGAGAACAGACTTTCCAGCTGCTGAAGTTATGGAAGCATCAAAACAAAGACCAAGATATGGTCAAGAAGATCATCCAAGATATCGAACTCTGTGAAAAGAGCGTGCAGAGGCACATTGGGCACATGAACCTCACCTTCGAGCAGCTTCGAAGGCTGATGGAAAGCTTGCCGGGGAAGAAAGTGACGACAGAAGACATTGAGAAAACAATGAAGACGTGCAAATCAAGTGATCAAATCCTGAAGCTTCTCAGCCTCTGGAGAATAAAAAATGATGACCAAGACACCCGCAAGGGCCTGATGCATGCCCTAAAGCACTTGAAGACATACCACTTCCCCAAAACTGTCACTCAGAGTCTGAAGAAGACCATCAGGTTCCTTCACAGCTTCACCATGTACAGATTATATCAGAAGCTATTTTTAGAAATGATAGGGAACCAGGTCCAATCATTAAAGATAAGCTGCTTATAA

Related Sequences

bmy_05133T0 Protein

Length: 289 aa      View alignments
>bmy_05133T0
MVSAAKVFEKNVLNGLVFSVGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSAFGLLLTQKGNATHDNICSGNSEPTHKCGIDMTLCEEAFFRFAVPTKLTPNWLSVLVDNLPGTKVNAESIERIKRRHSSREQTFQLLKLWKHQNKDQDMVKKIIQDIELCEKSVQRHIGHMNLTFEQLRRLMESLPGKKVTTEDIEKTMKTCKSSDQILKLLSLWRIKNDDQDTRKGLMHALKHLKTYHFPKTVTQSLKKTIRFLHSFTMYRLYQKLFLEMIGNQVQSLKISCL*