Part of scaffold_177 (Scaffold)

For more information consult the page for scaffold_177 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZC2HC1A ENSTTRG00000000916 (Bottlenosed dolphin)

Gene Details

zinc finger, C2HC-type containing 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000863, Bottlenosed dolphin)

Protein Percentage 81.03%
cDNA percentage 85.9%
Ka/Ks Ratio 0.60992 (Ka = 0.1414, Ks = 0.2318)

BT.63240 ENSBTAG00000018902 (Cow)

Gene Details

Zinc finger C2HC domain-containing protein 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025157, Cow)

Protein Percentage 79.15%
cDNA percentage 83.27%
Ka/Ks Ratio 0.40991 (Ka = 0.1512, Ks = 0.3688)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1287 bp    Location:1529290..1552948   Strand:+
>bmy_05134
ATCTATTTCTTTTTCCTGGATTTGGGAAAGTTTCTTTCTTTAGACTTGATATTCAGTGGATCTAAATATTTATCAGTTTTCACAAAGTCCACATTTGACACAGTGGAGCAGGGTGCTGTTATTGAGAAATTGAAGCAGCAGATGCTTTTCATCAGCAAGATGTTCATTTACTTGTTCAACAGCATTTTGAGAGTAACTCACACCAAAAAGAAGATGGTACCAGAAATCTCTAAGAAGTTAGATCTCTTGATTCTGATGTTGGGGCCGCAGCTCTCAGGGTTGGATATGGGCTTGATATGTGGGGTGATGGAAGATGAGCTGCATGTTCCTTCTCCTGGAAAAGGAAACCGTACAGTGTTTGGAGTAGAGCCACAAGATTCCATTCCAGAGCTGTCTTCTATTTTGTCCCTTACATGTATTAGTTACAGTGGAAAGAGGCTACGGCCGGAGCTGGGCGGCGGCGGTGGGTGCTGCCGGAGGAGTCTGGCGGAGCCCCAGGCGGTGGCGCTATGGAGTCCCTGGAATGGAAGTGTCCAAGTTGGAGAACTGTTACCTTGCAAGATTTGTGGAAGAACATTCTTTCCAGTGGCATTAAAAAAACATGGACCTATTTGCCAGAAAACTGCCACTAAAAAACGGAAGACTTTTGATTCAAGCAGACAAAGAGCTGAAGGAATGGATATTCCAACAGTAAAGCCTCTTAAACCTAGGCCTGAACCACCAAAGGAGCCATCTAATTGGAGAAGAAAGCATGAAGAGTTCATTGCCACCGTGAGAGCAGCTAAAGGCCTCAGTCAGGCCCTTAAAGAGGGTGGCACACTTCCTCCCCCTCCCCCACCTTCTTATGATCCTGAGAGAGTTAATGAAAATGCAGCCGATAGACATATAAATTTCTGTAAAGAACAGGCAGCGCATATTAGTAATAAAGGCAAATTTTCTACTGATAGCAAAGGAAAATCGACTTCTCGGACACAGTATAAGCCACCTGCACTTAAAAAGTCCAGTTCTCCTGGAACCACCTCATCAGGATATTCACGATTACCACAGCCAAGTGGCGCTAGCAAAACTGTTGTAGGTGTTCCTTCGGGTAAAGTGTCTTCAGTTCGCAGCTCTTTGGGAAACAAACTTCAGACCTTGTCTTCCTCCCATAAAGGGATAGCAGCCCCTCACGTAGGTAAGATGGACAAGTTAGGCCCTCCACTCCGAACTGGAAGACATGTGCAGAGGTCACATGACAGTGATGCAAAATCAGACAGTGCCATCAAAAGACATGAGTTATTACCCATT

Related Sequences

bmy_05134T0 Protein

Length: 429 aa      View alignments
>bmy_05134T0
IYFFFLDLGKFLSLDLIFSGSKYLSVFTKSTFDTVEQGAVIEKLKQQMLFISKMFIYLFNSILRVTHTKKKMVPEISKKLDLLILMLGPQLSGLDMGLICGVMEDELHVPSPGKGNRTVFGVEPQDSIPELSSILSLTCISYSGKRLRPELGGGGGCCRRSLAEPQAVALWSPWNGSVQVGELLPCKICGRTFFPVALKKHGPICQKTATKKRKTFDSSRQRAEGMDIPTVKPLKPRPEPPKEPSNWRRKHEEFIATVRAAKGLSQALKEGGTLPPPPPPSYDPERVNENAADRHINFCKEQAAHISNKGKFSTDSKGKSTSRTQYKPPALKKSSSPGTTSSGYSRLPQPSGASKTVVGVPSGKVSSVRSSLGNKLQTLSSSHKGIAAPHVGKMDKLGPPLRTGRHVQRSHDSDAKSDSAIKRHELLPI