Sequence detailsbmy_05140 (Coding sequence)

Part of scaffold_175 (SequenceType object (1))

For more information consult the page for scaffold_175 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GLI3ENSTTRG00000003628 (Bottlenosed dolphin)

Gene Details

GLI family zinc finger 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003403, Bottlenosed dolphin)

Protein Percentage 88.26%
cDNA percentage 90.46%
Ka/Ks Ratio 0.45066 (Ka = 0.0827, Ks = 0.1836)

GLI3ENSBTAG00000010671 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000033519, Cow)

Protein Percentage 84.04%
cDNA percentage 85.78%
Ka/Ks Ratio 0.26772 (Ka = 0.1053, Ks = 0.3935)

Additional orthologs identified in other species via the OPTIC pipeline.

GLI3 (Human)   Gli3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3483 bp    Location:1383360..1323082   Strand:-
Raw sequence 
>bmy_05140
ATGGTTAAGGTCAAAGCAAAGCAGACCAAATATGCAGGTCTGCTTTTGAGATATGATGACGATGGTGATGGTGATGATGATGGTGATGGTGATGGTGATGATGGTGATGGTGATGGTGATGGTAATGATGATGATGATGACGATGGTGATGATGGTGATGATGATGGTGATGGCGATGAGGATGAGGATGGTGACAATGAGGATGATGAAAAGAGTAGTACATTTCCATTTTATTTCTCTCATTCTTTTTCCAAACTCCAGCATATAAATAACGACCATATCCATGGAGAAAAGAAGGAGTTCGTGTGCCGGTGGCTAGACTGCTCGAGAGAACAGAAACCCTTCAAAGCCCAGTACATGCTGGTAGTGCACATGCGCAGGCACACGGGGGAGAAGCCTCACAAATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGACTCGAAAACTTGAAAACACACTTGAGATCTCACACTGGAGAGAAACCGTACGTCTGTGAGCACGAAGGTTGCAACAAGGCTTTCTCGAATGCCTCTGATCGCGCCAAGCACCAGAACAGGACACATTCCAACGAGAAACCGTACGTGTGCAAAATCCCCGGCTGCACCAAGCGCTACACAGACCCCAGCTCCCTCCGGAAGCACGTGAAGACCGTGCACGGCCCAGAGGCTCACGTCACCAAGAAGCAGCGTGGGGACGTGCATCCCAGGCCCCCGGCGCCACGAGATTCCGGCGGCCACTCACAGTCTAGGTCACCCGGCCGGCAGACTCAGGGAGCCCTCGGGGAGCAGAAAGACCTCAGCAACACTACCTCAAAGCGGGAAGAATGCCTCCAAGTGAAAACGGTCAAGGCGGAGAAGCCCATGACATCTCAGCCAAGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGGCTCGAGCTTCCTCTAACYGATGGAGGTGGTATGGGCGACCTCAGTGCCATCGACGAAACCCCAATCATGGACTCGACCATTTCCACTGCAACCACAGCCCTTGCTTTGCAAGCCCGGAGGAACCCGGCAGGGACCAAATGGATGGAGCACGTCAAGCTAGAAAGACTCAAACAAGTGAATGGAATGCTTCCGCGACTGCATCCCATTCTACCCCCCAAAGCCCCTGCGGTCTCTCCTCTCATAGGAAACGGCACGCAGCCCAGTACCAGCTGCAGTCTGGGCGGGCCCCCGTCCCTTCTCCCGAACAGAAGCGACCTTTCTGGGGTGGACATCACCATGTTGAACCTGCTCAACCGGAGAGACAGCAGCGCCAGCACCATCAGCTCCGCCTACCTGAGCAGCCGCCGCTCTTCCGGCATCTCGCCCTGCTTCTCCAGCCGCCGCTCCAGCGAGGCGTCCCAGGCCGAGGGGCGGCCCCAGAACGTGAGCGTGGCCGACTCCTACGACCCCATCTCCACCGACGCGTCGCGCAGGTCCAGCGAGGCCAGCCAGGGCGACGGGCTGCCCAGCCTGCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTGAAAGCCAAGTACGCCGCTGCCACGGGCGGYCCGCCGCCCACCCCGCTGCCCAACATGGAGAGGATGAGCCTCAAGACCCGGATGGCCCTGCTGGGCGATGGCAGGGAGCCCGCGGGGACCCTGCCTCCCGTACATCCTCCCCGGAGATGCAGCGACGGCGGGGCCCACGGGTACGGCCGGCGCCCGCTGCTGCCCCAGGATGCGCTGGGCAACGGCGTGAGAAGAGCCAGCGACCCGGTGCGGACGGCCTCCGAGAGCCTCTCCCTGCCCCGGGTGCAGCGATTCAACAGCCATAACAGCTTCAACCCTCCGGTGTTGCCTCCGTCCCTGGAGAAGCGTAATCTAGTGCTTCAGAACTACACGCGGCCGGACGGGGGCCAGTCCCGACCCTTCCACGCGTCTCCCTGTCCCCCGAGCATTACTGAGAACGTCACCCTGGAGTCCCTGACCATGGACGCCGATGTAAGCCTGAACGATGAGGATCTCCTGCCCGACGACGTGGTGCAGTATTTAAACTCCCAGAACCCAGTCGGGTATGAGCAGCACTTCCCGGGCACCGTCTCTGATGACAGCAAAGTGCCCCACGGGCCCGGCTTGGGGAGCGGGCCCGGCGACTTTGACCCGCTTGGGCTGCCCGGCAGCCACGCCAGCCAGCAGTATCGCGGGCTGGAACCGCCCTGCACTGATGCCAGTAAATCCGACCTGCCCATTCAGTGGAATGAAGTCAGCTCAGGCAGCGCTGACCTGTCCTCCTCCAAGCTGAAATGCGGCCCGCGGTCCACAGCGCAGCAGGCCCGCGCCTTCGCGTTGTACAGCCACGTGGGCGTCCACCCACAGAATCCCTTGAGGAGCGGGGCTGGCCCAGCTGGGGGGTATCCGACCCCCGGGGAGCACGGCAGCTCCTTCGGGGGCCCGGAGCACTTGGTGAGCCACGGCGGCGGCGGCGGAGCTGCGGGCACCAACGGGAACGCCTTCCACGAACAGCCCTATAAGGCCCAGCAGTATGGAAACTGCCTGGCCCGGCAGCCCGGCTCCCCCGGCTTGCTCGACGGGGCCTGCGGTGCCGGGATCCAGGCAGCAAAGCTGAAAAGCATCCCCATGCCAGGGAGCGGGAGCCAGCCGGATTTTGGCCTGTCGGTGGCACCGAACGAGTCAGCCGGCAGCACGGTGAATGGCATGCCCAGCCCAGACCCGGTGGGACAGGGGTACCTGGCGCATCAGCTCCTTAGTGACAGCATGCACCCCCAGGGGGCAGGCCGCCCCGGGCAGCACATGCTGGGGCACGGTAGCGCTACCTCACATATCCACGTCTATCAAGGGCCAGAARGCGGCCTGCCAGGGCCTCCCAGCACYGGCATCCAGCTGTCAAGCTTGGCAGCCGTCAGGGGCTACCAGCCGTGTGCCAGCTACGGGGGCAGCCGGCGCCAGGCTGGGCCGAGAGGCRGCCTCGCTCTGCAGCCAGGACAGCTCAGTGACCCAAGTCAGACCTGCAGGGTGAACGGCATCAAGATGGAGATGCCAGGGCAGCCCCATCAGCTCTATTCGAATGTGCAGAGTTACTCTGGTCAGTTCTATGACCAAACCATTGGCTTCGGTCAGCAAGACATGAAAACCGGGTGCTTCTCCGTGTCAGAAGCCAACTGCCTGCTCCAGGGGGTGAGCGCCGAAAACTCTGAATTACTCTCCCCAGGTGCTAACCAGGTGACGAGCACAGTGGACAGCCTCGACAGCCATGACCTGGAAGGGGTGCAGATTGATTTCGATGCTATCATAGATGACGCGGACCACGCCAGCCTGATATTTGCAGGAGACACTCATGCTTCAGCTCAGTATTTGGCTTCTCTCAGTATGGAAATCTCAGAAGGATGGAGGAAAGGAGAGGCGGAAGAGGAAAGTGTATTTTTCCAATCTGTTTTGATAGGCTTGCGGTAG

Related Sequences

bmy_05140T0 SequenceType object (3)

Length: 1161 aa      View alignments
>bmy_05140T0
MVKVKAKQTKYAGLLLRYDDDGDGDDDGDGDGDDGDGDGDGNDDDDDDGDDGDDDGDGDEDEDGDNEDDEKSSTFPFYFSHSFSKLQHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDVHPRPPAPRDSGGHSQSRSPGRQTQGALGEQKDLSNTTSKREECLQVKTVKAEKPMTSQPSPGGQSSCSSQQSPISNYSNSGLELPLTDGGGMGDLSAIDETPIMDSTISTATTALALQARRNPAGTKWMEHVKLERLKQVNGMLPRLHPILPPKAPAVSPLIGNGTQPSTSCSLGGPPSLLPNRSDLSGVDITMLNLLNRRDSSASTISSAYLSSRRSSGISPCFSSRRSSEASQAEGRPQNVSVADSYDPISTDASRRSSEASQGDGLPSLLSLTPAQQYRLKAKYAAATGGPPPTPLPNMERMSLKTRMALLGDGREPAGTLPPVHPPRRCSDGGAHGYGRRPLLPQDALGNGVRRASDPVRTASESLSLPRVQRFNSHNSFNPPVLPPSLEKRNLVLQNYTRPDGGQSRPFHASPCPPSITENVTLESLTMDADVSLNDEDLLPDDVVQYLNSQNPVGYEQHFPGTVSDDSKVPHGPGLGSGPGDFDPLGLPGSHASQQYRGLEPPCTDASKSDLPIQWNEVSSGSADLSSSKLKCGPRSTAQQARAFALYSHVGVHPQNPLRSGAGPAGGYPTPGEHGSSFGGPEHLVSHGGGGGAAGTNGNAFHEQPYKAQQYGNCLARQPGSPGLLDGACGAGIQAAKLKSIPMPGSGSQPDFGLSVAPNESAGSTVNGMPSPDPVGQGYLAHQLLSDSMHPQGAGRPGQHMLGHGSATSHIHVYQGPEXGLPGPPSTGIQLSSLAAVRGYQPCASYGGSRRQAGPRGXLALQPGQLSDPSQTCRVNGIKMEMPGQPHQLYSNVQSYSGQFYDQTIGFGQQDMKTGCFSVSEANCLLQGVSAENSELLSPGANQVTSTVDSLDSHDLEGVQIDFDAIIDDADHASLIFAGDTHASAQYLASLSMEISEGWRKGEAEEESVFFQSVLIGLR*