Sequence detailsbmy_05149 (Coding sequence)

Part of scaffold_181 (SequenceType object (1))

For more information consult the page for scaffold_181 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RCBTB1ENSTTRG00000012937 (Bottlenosed dolphin)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012273, Bottlenosed dolphin)

Protein Percentage 89.41%
cDNA percentage 89.02%
Ka/Ks Ratio 0.09898 (Ka = 0.0033, Ks = 0.0332)

RCBTB1ENSBTAG00000034269 (Cow)

Gene Details

RCC1 and BTB domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000035664, Cow)

Protein Percentage 97.65%
cDNA percentage 92.68%
Ka/Ks Ratio 0.03756 (Ka = 0.0111, Ks = 0.2966)

RCBTB1 (Minke Whale)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1

External Links

Gene match (Identifier: BACU018866, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.54%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0153)

Additional orthologs identified in other species via the OPTIC pipeline.

RCBTB1 (Human)   Rcbtb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1533 bp    Location:219756..186849   Strand:-
Raw sequence 
>bmy_05149
ATGGTGGATGTAGGAAAGTGGCCAGTCTTCACTCTGCTCTCACCTCAAGAAATTGCATCTATTCGGAAAGCTTGTGTCTTCGGCACCTCAGCCAGCGAGGCACTGTATGTTACTGACAATGACGAGGTCTTTGTATTTGGACTGAACTACAGTAACTGTCTAGGAACTGGAGATAACCAGAGTACACTTGTACCCAAAAAGCTGGAAGCCTTATGTGGAAAGAAGATTAAGAGCCTTAGTTATGGGAGCGGACCACATGTTCTTCTCAGCACCGAAGATGGAGTTGTTTATGCCTGGGGCCACAATGGATATAGCCAGCTTGGGAATGGGACGACCAACCAAGGCATTGCTCCCATCCAAGTCTGCACCAACCTCTTGATCAAGCAAGTGGTTGAAGTGTTTGCTTGGGGCTATAACAACTGTGGCCAGGTGGGATCGGGATCTACAGCAAATCAACCAACTCCTCGCAAAGTTACAAACTGTTTACATATTAAGAGGGTGGTTGGCATTGCCTGCGGTCAGACCTCGTCCATGGCTGTTCTGGACAATGGTGAGGTATACGGCTGGGGCTACAACGGCAATGGTCAGCTAGGCTTGGGAAACAACGGCAATCAGCTGACCCCCGTGAGAGTGGCAGCTTTGCACAGCATTGTCTGCGGCTATGCACATACTCTAGCACTAACTGATGAGGGCTTGCTCTATGCCTGGGGAGCTAACACGTATGGGCAGCTGGGAACTGGCAATAAAAATAACCTGCTAAGCCCAGCACACATCATGGTGGAGAAAGAAAGGGTAATAGAGATTGCGGCCTGCCACTCTGCCCACACGTCTGCAGCCAAGACGCAGGGAGGGCACGTGTACATGTGGGGCCATTGCCGGGGCCAGTCGGTGACCCTGCCTCACCTCACCCACTTCTCCTCCACCGACGACGTGTTCGCCTGCTTCGCCACGCCTGCCGTCACCTGGCGCCTCCTGTCTATAGAGCATGAAGACTTTTTAACAGTTGCAGAGTCACTGAAGAAAGAATTTGACAGTCCAGAAACTGCCGATCTGAAGTTTCGAATTGATGGGAAATATATCCATGTCCATAAAGCTGTTTTGAAAATCAGGTGTGAGCACTTTCGATCCATGTTCCAGTCTTATTGGAATGAGGACATGAAGGAGGTGATAGAAATAGACCAGTTTTCCTACCCAGTGTACCGTGCCTTTCTCCAGTACCTCTACACAGATACAGTGGATCTGCCGCCTGAAGATGCTATAGGCCTTTTGGATTTGGCGACGTCTTACTGTGAAAACAGACTGAAGAAACTTTGTCAGCACATTATCAAGCGAGGAATCACTGTGGAGAATGCCTTTTCATTGTTCTCTGCCGCGGTCAGATATGATGCAGAGGATTTAGAAGAATTCTGCTTTAAGTTTTGCATCAATCATTTGACAGAAGTTACACAGACTGCAGCATTTTGGCAAATGGATGGCCCTCTGCTAAAGGAGTTCATTGCTAAAGCCAGTAAATGTGGAGCCTTTAAGAACTGA

Related Sequences

bmy_05149T0 SequenceType object (3)

Length: 511 aa      View alignments
>bmy_05149T0
MVDVGKWPVFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGHCRGQSVTLPHLTHFSSTDDVFACFATPAVTWRLLSIEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVTQTAAFWQMDGPLLKEFIAKASKCGAFKN*