Part of scaffold_188 (Scaffold)

For more information consult the page for scaffold_188 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF146B ENSBTAG00000034531 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF146-B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037915, Cow)

Protein Percentage 97.31%
cDNA percentage 94.71%
Ka/Ks Ratio 0.05476 (Ka = 0.011, Ks = 0.2007)

RNF146  (Minke Whale)

Gene Details

ring finger protein 146

External Links

Gene match (Identifier: BACU014285, Minke Whale)

Protein Percentage 98.27%
cDNA percentage 98.46%
Ka/Ks Ratio 0.16894 (Ka = 0.0066, Ks = 0.039)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1044 bp    Location:769562..770605   Strand:+
>bmy_05168
ATGCTTCCTACGAACAGGAAAGCAAATGAGTCCTGTTCTAATACTGCACCTTCTCTAACTGTCCCTGAATGTGCCATTTGTCTGCAAACATGTGTTCACCCAGTCAGTCTGCCTTGCAAGCATGTTTTCTGCTATCTATGTGTGAAGGGAGCGTCATGGCTTGGAAAGCGATGTGCCCTCTGTCGACAAGAAATTCCCGAGGATTTCCTTGATAAGCCAACCTTATTGTCACCAGAAGAACTCAAGGCAGCAAGTAGAGGAAATGGTGAATATGCATGGTATTATGAAGGAAGAAATGGGTGGTGGCAGTATGATGAGCGTACTAGTAGAGAGCTGGAAGATGCTTTTTCCAAAGGTAAAAAGAGCACCGAAATGTTAATTGCCGGGTTTCTGTATGTTGCCGATCTTGAAAATATGGTTCAATATAGGAGAAATGAACATGGACGTCGCAGGAAGATTAAGCGGGATATAATAGATATACCAAAGAAGGGAGTAGCCGGACTTAGGCTGGACTGTGATGCTAATACCGTAAACCTAGCAAGAGAGAGCTCTGCTGATGGAGCGGACAGTGTATCAGCACAGAGTGGAGCTTCTGTTCAGCCTCTAGTGTCTTCTTCTGTAAGKCCCCTGACGTCAGTAGATGGTCAGTTAACAAGCCCTGCAACACCATCCCCTGATGCAAGCACTTCTCTGGAAGACTCTTTTGCACATTTACAGCTCGGTGGAGACAGCATAGCTGAAAGGAGTCATAGGGGGGAAGGAGAAGAAGATCATGAGTCACCATCTTCAGGCAGGGTACCAGCACCAGACACTTCCATTGAAGAAACCGAATCAGATGCCAGTAGTGATAGTGAGGATGGATCTGCGCTTGTCGCGCAACACTCCTTGACCCAACAGAGACTTTCGGTTCCTAATCCCAACCAGACAGTATCTGATCGATCTGATCTATCAGGAACTGATCGATCCGTGGCAGGGGGTGCAACAGTGGGTGTCAGTGTCAGATCCAGAAGGCCTGATGGACAGTGCACAGTAACTGAAGTTTAG

Related Sequences

bmy_05168T0 Protein

Length: 348 aa     
>bmy_05168T0
MLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERTSRELEDAFSKGKKSTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGLRLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSSVXPLTSVDGQLTSPATPSPDASTSLEDSFAHLQLGGDSIAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDGSALVAQHSLTQQRLSVPNPNQTVSDRSDLSGTDRSVAGGATVGVSVRSRRPDGQCTVTEV*