Sequence detailsbmy_05175 (Coding sequence)

Part of scaffold_178 (SequenceType object (1))

For more information consult the page for scaffold_178 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OSBPL1AENSTTRG00000002790 (Bottlenosed dolphin)

Gene Details

oxysterol binding protein-like 1A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002616, Bottlenosed dolphin)

Protein Percentage 66.06%
cDNA percentage 69.43%
Ka/Ks Ratio 0.39531 (Ka = 0.1902, Ks = 0.4812)

OSBPL1AENSBTAG00000023259 (Cow)

Gene Details

Oxysterol-binding protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007419, Cow)

Protein Percentage 71.57%
cDNA percentage 74.16%
Ka/Ks Ratio 0.31313 (Ka = 0.2357, Ks = 0.7528)

OSBPL1A (Minke Whale)

Gene Details

oxysterol binding protein-like 1A

External Links

Gene match (Identifier: BACU017855, Minke Whale)

Protein Percentage 71.57%
cDNA percentage 76.53%
Ka/Ks Ratio 0.4637 (Ka = 0.2365, Ks = 0.5101)

Additional orthologs identified in other species via the OPTIC pipeline.

OSBPL1A (Human)   Osbpl1a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1818 bp    Location:128738..176318   Strand:+
Raw sequence 
>bmy_05175
ATGAAGCGAGTGGGACGGGAGCTTTCCCTTAAAGACCAGTCATTGTGTCGTTGTGTCCGTAGTCAGAGCGGCATCTGTATGGTTGAAAATAGAGCCGGGGTGCATCACTCTCAGTCCCTGGTACATGGAACAAGCTTGCCCTCCCCTATGTTTTCCAGAAATGACTTCAGCATCTGGAGCATCCTCAGAAAATGTATTGGAATGAGTTACCCAGAAAGGCTCGAAAAGAGCAGAGTCCCCTCAGTACAGAATATAATTCCACTTACGCTTCTGTGCACAGAGCTGGTCTTTGTACCTTGCAGTCATCTGGCATTTGGAAGTTATTGTTCTCGGGGCACCATGTCTCCCCTCTCATGGGCAGCGGAATCAGTCCAAGGGGCAAAATGTAGAAAACGAGAGCAGAGCCAGAAATGGCATCATTTACGTCACATACTGTCACGGGCCAGGGCTCATGTTGCCACCCTGGTGAACCCCTGTCATCTTGGCGATTGGACGGGACAGTCAGCCAGCAGCGAGAGCCTCAGCAGCGGGGACTACGCGATGCCTTCTGGCTGGGGCTCCGGGGGGAACAGGTTGGAACTCAAGCCACGCTGCCATCTGAGTGCCTTCTCTGCAGCTCGGCTGCCCAGGCGACAGGATGAGGAACTCTCCAAGATCACCATGCCAGTTATATTTAACGAGCCTTTGAGCTTCCTCCAGCGACTCACTGAATATATGGAGCATACGTACCTCATCCACAAGGCCAGTTCATTTGCTGATCCTGTGGAAAGGATGCAGTGTGTAGCTGCATTTGCTGTATCTGCTGTTGCTTCTCAGTGGGAACGTACTGGAAAGCCTTTCAACCCACTTCTGGGAGAGACTTATGAATTAGTTCGAGATGACCTTGGTTTCAGACTCATCTCTGAGCAGGTCAGCCATCACCCACCCATTAGTGCATTTCATGCTGAAGGATTAAACAATGATTTCATCTTTCATGGCTCAGTCTATCCCAAACTGAAGTTCTGGGGGAAGAGTGTAGAAGCAGAACCCAAAGGAACCATCACGTTGGAGCTCCTTGAACACAATGAAGCATATACGTGGACAAATCCTACCTGCTGTGTACATAACATCATTGTGGGGAAACTCTGGATTGAGCAGTACGGCAACGTGGAGATCACAAACCACAAGACTGCGGACAAATGTGTGTTGAATTTTAAGCCATGTGGCCTTTTTGGTAAGGAGTTACACAAAGTTGAAGGCTACATTCAAGATAAAAGCAAAAAGAAGCTCTGTGCCCTCTATGGGAAGTGGACAGAATGTTTATACAGTGTTGACCCTGCCACATTTGATGCTTACAAAAAAAATGATAAGAAAAATACTGAAGAGAAGAAGAACAGCAAACAGATGAGCGCTTCTGAGGAGTCAGATGAAATGCCAATGCCAGATTCCGAGAGTGTGTTTGTCATCCCTGGGAGCGTCCTCCTGTGGCGAATAGCCCCGCGGCCTCCCAATTCGACCCAGATGTATAATTTCACTAGCTTTGCAATGGTTTTGAATGAAGTAGACAAGGAAATGGAGAGTGTGATTCCTAAGACAGACTGCAGGCTACGTCCTGACATCAGAGCCATGGAGAATGGGGAAATAGATCAAGCTAGTGAAGAAAAAAAGCGCCTTGAGGAGAAACAAAGAGCGGCCCGCAAGAGCAGGTCCAAGTCGGAGGAGGAGTGGAAGACGAGGTGGTTCCATCAAGGTCCTAATCCCTACAGCGGAGCCCAGGACTGGCTTTACTCGGGCAGCTACTGGGACAGAAACTACTTCAATTTGCCTGACATTTATTAA

Related Sequences

bmy_05175T0 SequenceType object (3)

Length: 606 aa      View alignments
>bmy_05175T0
MKRVGRELSLKDQSLCRCVRSQSGICMVENRAGVHHSQSLVHGTSLPSPMFSRNDFSIWSILRKCIGMSYPERLEKSRVPSVQNIIPLTLLCTELVFVPCSHLAFGSYCSRGTMSPLSWAAESVQGAKCRKREQSQKWHHLRHILSRARAHVATLVNPCHLGDWTGQSASSESLSSGDYAMPSGWGSGGNRLELKPRCHLSAFSAARLPRRQDEELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFADPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSVYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEITNHKTADKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSASEESDEMPMPDSESVFVIPGSVLLWRIAPRPPNSTQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKSRSKSEEEWKTRWFHQGPNPYSGAQDWLYSGSYWDRNYFNLPDIY*