Part of scaffold_178 (Scaffold)

For more information consult the page for scaffold_178 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC39C ENSTTRG00000002787 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 39C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002614, Bottlenosed dolphin)

Protein Percentage 87.72%
cDNA percentage 87.95%
Ka/Ks Ratio 0.424 (Ka = 0.0543, Ks = 0.128)

TTC39C ENSBTAG00000005635 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007408, Cow)

Protein Percentage 93.36%
cDNA percentage 91.26%
Ka/Ks Ratio 0.22279 (Ka = 0.0511, Ks = 0.2295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:249116..233431   Strand:-
>bmy_05180
ATGAGTTTTGGAGCTAGCTTTGTCAGTTTCTTGAATGCCATGATGACATTTGAGGAAGAAAAAATGCAGTTGGCATGTGACGACTTAAAAACCACAGAAAAGCTGTGTGAAAGTGAAGAGGTTGGAGTAATTGAAACAATCAAGAATAAAATTAAGAAGAATGTTGATGTCCGAAAATCCACCCCTTCTATGGTTGATCGGCTTCAGAGGCAGATAATCATAGCTGACTGTCAAGTTTACTTGGCTGTGCTCTCATTTGTAAAGCAAGAATTGTCAGCATATATAAAAGGTGGGTGGATCCTTAGGAAAGCCTGGAAGATTTACAATAAATGCTATTTGGACATCAATGCCCTCCAGGAGCTGTATCAGAAGAAGCTAACGGAAGAGCCCTTGACTTCTGACGCTGCAAATGATAATCACATTGTGGCTGAAGGGGTGTCTGAGGAGTCTCTAAACAGACTGAAAGGTGCTGTGAGCTTTGGATATGGCCTTTTTCACCTTTGCATATCCATGGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCTGGGTTTTCCTGGAGACCGCCTACAGGGGCTTTCTTCACTGATGTATGCAAGCGAAAGTAAGGACATGAAGGCCCCTTTAGCTACATTAGCGCTGCTCTGGTATCATACTGTAGTCCGCCCGTTTTTTGCCCTGGATGGCAGTGATAACAAAGCAGGCCTGGATGAAGCGAAGGAAATTCTTCTCAAAAAAGAAGCTGCTTATCCAAATTCTTCCCTCTTTATGTTTTTCAAGGGACGCATACAACGATTAGAGCTGTGGGCGAAGCAGGGCCGGGGTCCCTTGGCGCTGATGAGACGAGATGCTGCACCCTGA

Related Sequences

bmy_05180T0 Protein

Length: 287 aa      View alignments
>bmy_05180T0
MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEVGVIETIKNKIKKNVDVRKSTPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEEPLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLELWAKQGRGPLALMRRDAAP*