Sequence detailsbmy_05190 (Coding sequence)

Part of scaffold_178 (SequenceType object (1))

For more information consult the page for scaffold_178 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBBP8ENSTTRG00000009810 (Bottlenosed dolphin)

Gene Details

Retinoblastoma binding protein 8

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009315, Bottlenosed dolphin)

Protein Percentage 78.75%
cDNA percentage 82.99%
Ka/Ks Ratio 0.62823 (Ka = 0.1051, Ks = 0.1673)

RBBP8ENSBTAG00000006743 (Cow)

Gene Details

DNA endonuclease RBBP8

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008875, Cow)

Protein Percentage 84.84%
cDNA percentage 89.26%
Ka/Ks Ratio 0.34283 (Ka = 0.0862, Ks = 0.2516)

Genome Location

Sequence SequenceType object (2)

Length: 2622 bp    Location:1164412..1085109   Strand:-
Raw sequence 
>bmy_05190
ATGAACGTCTCGGGAAGCAGTTGTGGAAGCCCTAGTTCTGCAGATGTATCTAATGACTTTAAGGATCTTTGGACAAAACTAAAGGAGTATCATGATAAAGAAGTACAAGGTTTACAAGTAAAAGTAACCAAACTGAAAAAGGAACGAATTTTAGATGCACAGAGACTAGAAGAATTCTTTACCAAAAATCAACAGCTGAGAGAGCAGCAGAAAGTCCTTCATGAAACCATTAAAGTTCTAGAAGATCGGATCAGTGAACAATCAAGAGTTGACTCTTTTTCACAGTTGTCCTTATTTTCCTCTAGGAATGATCAACCACATCAAGCAACCGATCTTGAAACTGAGGAAGATGTTATTCCAGATTCACCAATAACAACCTTTTCATTTTCTGGCGCTAACCGACTACGAAGGAAGGAGAACCTCCACGTCCGATACGTAGAACAAACACATACTAAACTGGAGCACTCTGGGTGTGCACATGAATTGAGAAAAGTACCAAAGTCTTCAACTCATCCACAACATAAACATAATGAACGTGAAATTCTAGTGGCTGACACTTGTGATCAGAGTCAAGCTCCAGTGGCTAATACACATGGAAAAAGCAGTTATCCTCCTGATAATTTAGCTACAGTTGTTGCTGAAACACTTGGACTTAGTGTTCAAGATGAGTCTGAAAAAAGCTTTACCGCTCTTTATTTTTTTAGATTTTCAGATTCTAATTCAAAGACTCCTCCTCAAGAAGAATTGACTACTCGGGTATCATCTCCTGTATTTGGAGCTACCTCTAATGTGAAAAGTAGTTTAGGTTTGAATACAAGTTTGTCCCCTTCTCTTTTAGAGACTGGGAAAAAAAACCATCTGAAAACAATGCCTTTCAGCAACACTTCTAATTCTAGATCAGAGAATCCTAGATCAAAATCTGAAGATGGTGCCCTTTTCACACATCATAATATTGGGGCTGAAGTGAAGAAGATCACTAACCAGTCATCTTCTAATAAGCAGATGCTTATAAATAAAAATACAAGTGAACAGGATAGTATTGATCACATTAAAGATACTGTTACTGATAAAGATAAACATGTAGTACCCCTGAAATCACTGGGAGGCCGAACCAAAAGAAAGAAAATCGAGGAAGAAAGTGAAGATGAAGTAAGCTGCCCCCAAGCCTCCTTTGATAAAGAAAATGCTTTTCCTTTTCCACCGGATAGTCATTCTTACATGAATGGCGACTATGTGATGGATAAACCTCTGGATCTGTCTGATCGATTTTCAGCTATTCAGCGTCAAGAGAAAAGCCAAGGAAGTGAGAACTCTAAAATCGGATTTAGGCAAGTGACTCTCTATGAGGTTTTGAAGCCTGTTCCAAAGGGCTCTTCCTCAAGCCGTAAGGCCTTGAGTGGGAGCTGTGGGTTAACCAAAGATTCCCCAGAAGAGCCCAGCAGTTTACAGGAGTCCCTCCTCCAGTCCGTGAGTAAATCTCCGGATAATAAAACACTGTTACAAATAAAGGAAGAAAATTCTATCTTTAAAATCCCTCTACGTCCACGTGAAAGTTTGGAGACAGAGAATCTTTTTGACGACATGAAGGGTGCTGGTTCTCGTGAGCCTATAAAAGTAAAAACCAGGTCAGTCCATGGAGCATGTGAACTTGCATCAGTTCTTCAGTTAAATCCATGTAGAATTGCTAAAACAAAGTCTCTACAAAACAACCAAGATGTATCCTTTGAAAACATCCAGTGGAGTATAGATCCAGGAGCAGACCTTTCTCAGTATAAAATGGATATCACTGTAGTAGATACAAAGGATGGCAGTCAGTCAAGATTAGCAGGAGGAGAGACAGTGGACATGGATTGTACATTGGTTAGTGAAACTGTGCTTTTAAAAATGAAGAATCAAGAGCAGAAGGGAGAAAAAAGTCCAAGCTTGGGGTTTACTGTTGCCTCATACACATCTGAATTATTTTGTGGCAGTTCCTACAAGTTTCACATTGGTCTACATAGAAAGCAAAAAGCTTGCTTGTTGCCTAAGCCAATGCTCTTTCACATAGATGGAGAAAGAAAAATGAATGATAGCTTGGAAGATATGTTTGATCGGACTACACATGAAGAATATGAATCGTGTTTGGTGGATAGCTTCCCCCAAGTAGCAAATGAAGAGGAGTTGTCAACTGCTACAAAAAAACCAAACTCTCCTGGTGATAAAAAAGATAAAGTCAAACAGAAAGCATTTGTGGAGCCATATTTTAAAGATGATGAAAGAGAGACTAGCTTACAAAATTTTCCTCATATTGAGGTAGTCCGGAAAAAAGAAGAAAGAAGAAAATTGCTTGGACACACATGTAAGGAATGTGAAATTTGGAAAACTCACCAGTTTTATTATCAGTATTATGCAGATTTTCCAGCAGAAGAAAGAGAAAAGAAGTTGGCTTCCTGCTCAAGACACCGATTTCGCTACATTCCACCCAATACACCAGAGAATTTCTGGGAAGTTGGTTTTCCTTCCACTCAGACTTGTATGGAAAGAGGTTACATTAAAGAAGATCTTGATCCTTGTCCTCGTCCAAAAAGACGGCAGCCTTACAATGCAATATTTTCTCCAAAAGGCAAAGAGCAGAAGATATAA

Related Sequences

bmy_05190T0 SequenceType object (3)

Length: 874 aa      View alignments
>bmy_05190T0
MNVSGSSCGSPSSADVSNDFKDLWTKLKEYHDKEVQGLQVKVTKLKKERILDAQRLEEFFTKNQQLREQQKVLHETIKVLEDRISEQSRVDSFSQLSLFSSRNDQPHQATDLETEEDVIPDSPITTFSFSGANRLRRKENLHVRYVEQTHTKLEHSGCAHELRKVPKSSTHPQHKHNEREILVADTCDQSQAPVANTHGKSSYPPDNLATVVAETLGLSVQDESEKSFTALYFFRFSDSNSKTPPQEELTTRVSSPVFGATSNVKSSLGLNTSLSPSLLETGKKNHLKTMPFSNTSNSRSENPRSKSEDGALFTHHNIGAEVKKITNQSSSNKQMLINKNTSEQDSIDHIKDTVTDKDKHVVPLKSLGGRTKRKKIEEESEDEVSCPQASFDKENAFPFPPDSHSYMNGDYVMDKPLDLSDRFSAIQRQEKSQGSENSKIGFRQVTLYEVLKPVPKGSSSSRKALSGSCGLTKDSPEEPSSLQESLLQSVSKSPDNKTLLQIKEENSIFKIPLRPRESLETENLFDDMKGAGSREPIKVKTRSVHGACELASVLQLNPCRIAKTKSLQNNQDVSFENIQWSIDPGADLSQYKMDITVVDTKDGSQSRLAGGETVDMDCTLVSETVLLKMKNQEQKGEKSPSLGFTVASYTSELFCGSSYKFHIGLHRKQKACLLPKPMLFHIDGERKMNDSLEDMFDRTTHEEYESCLVDSFPQVANEEELSTATKKPNSPGDKKDKVKQKAFVEPYFKDDERETSLQNFPHIEVVRKKEERRKLLGHTCKECEIWKTHQFYYQYYADFPAEEREKKLASCSRHRFRYIPPNTPENFWEVGFPSTQTCMERGYIKEDLDPCPRPKRRQPYNAIFSPKGKEQKI*